Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0174 ATGGCAGCAATTTCTACTTTCTACCCTTACAATACCGTTCGTTCTTCTTCTTCTTGTCATTGTTTTTCGAATTTGGGCAAGTGGCATTTGACCTCAAAATCTACTCGTGGAAGAGGAACATGCAAGTTCGTGGGGCTTGCGGCGCATTCCAATCCTATGATTTTAAAGACCAATCGGAAATCGAGGTTCGGACAGCCGCTGTCACCGTACGACAGTGACGAAGATGAAGCTATGGAGGACGAGGATGATGATGATGATGATGTGGTGCAAGATGATTTGGTGTCTGATGAAGAATTTGCAGATACTGCCGACTTTGATGTTAATGATAAGCAATTTAAGTCACAGACAACAAAAGGAAAAGGTAGGCAGCAGGAAATGGGGTGGGGTGTAAGATCTTTTGATTCTAGACATAGCCCTAAAATGTTCAAAAGTGAGAAAGAGGCTTCCTTGCAACTAAACGGCAGTGTAAGGCCTGGTAGAAATTTAAAGGAGAACAGATATCCTCTGTTGTCAGAAGAGATAGGTTTGGATGAGAAATGGTTACCACTTCTTGATTACTTAAGCTCATTTGGAATTAAGGAATCACAGTTTATCCAAATGTATGAGAGGCACATGCCATCACTACAAATTAATGTATGTTCTGCACAGGAAAGGTTAGAATACCTAATGAGTGTTGGTGTTAAACATAGAGATGTAAGAAAAATCATTTTGAGGCAGCCACAAATTTTGGAGTATACAGTGGAAAACAATTTGAAGTCCCATGTTGCATTCTTGACGGGCTTGGGTATACCAAATTCCAGAATAGGGCAAATCATTTCTGCTGCTCCATCCCTGTTTTCTTATAGTATTGAAAATTCATTGAAACCAACAGTAAGATATTTAGTTGAGGAAATTGGCATCAAGGAAAAAGATTTGGGTAAAGTCATTCAGCTGAGCCCTCAAATTCTTGTTCAGCGTATTGACATTTCATGGAATACTCGATATATGTTTCTTACCAAAGAGTTGGGAGCACCCAGAGATAGCATAGTGAAGATGGTGACAAAACATCCCCAGCTACTCCATTACAGCATATATGATGGATTACTGCCAAGGATAAATTTCCTAAGGAGCATTGGAATGTGTAATTCAGATATCTTAAAAGTCTTGACTAGCCTTACACAGGTGTTATCTCTGTCCCTGGAGGAGAATCTGAAGCCCAAGTATTTGTACCTGGTAAATGAACTTCACAATGAGGTTCAGTCTTTGACCAAATATCCAATGTACCTTAGCTTGTCTTTAAACCAGAGAATACGTCCTCGTCATAGGTTCCTGGTTTCTCTGAAGAAAGCTCCAAAAGGACCATTTCCACTAGGATCCCTGGTTCCAACTGATGAATGCTTTTGCCAGCAGTGGGCTGGAACTAGTTTGGATAAGTATTTGGCATTTCGTCAGAGATTATTACTCAAGAAGTTTGCTGAAAAATATGGAAAGAGAATGTGA 1479 0.4003 MAAISTFYPYNTVRSSSSCHCFSNLGKWHLTSKSTRGRGTCKFVGLAAHSNPMILKTNRKSRFGQPLSPYDSDEDEAMEDEDDDDDDVVQDDLVSDEEFADTADFDVNDKQFKSQTTKGKGRQQEMGWGVRSFDSRHSPKMFKSEKEASLQLNGSVRPGRNLKENRYPLLSEEIGLDEKWLPLLDYLSSFGIKESQFIQMYERHMPSLQINVCSAQERLEYLMSVGVKHRDVRKIILRQPQILEYTVENNLKSHVAFLTGLGIPNSRIGQIISAAPSLFSYSIENSLKPTVRYLVEEIGIKEKDLGKVIQLSPQILVQRIDISWNTRYMFLTKELGAPRDSIVKMVTKHPQLLHYSIYDGLLPRINFLRSIGMCNSDILKVLTSLTQVLSLSLEENLKPKYLYLVNELHNEVQSLTKYPMYLSLSLNQRIRPRHRFLVSLKKAPKGPFPLGSLVPTDECFCQQWAGTSLDKYLAFRQRLLLKKFAEKYGKRM 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0174 492 Pfam mTERF 182 439 IPR003690 GO:0003690|GO:0006355
Glsi08g0174 492 MobiDBLite consensus disorder prediction 57 88 - -
Glsi08g0174 492 MobiDBLite consensus disorder prediction 110 133 - -
Glsi08g0174 492 Gene3D Transcription termination factor 3, mitochondrial 240 479 IPR038538 -
Glsi08g0174 492 FunFam Transcription termination factor MTERF9, chloroplastic 244 479 - -
Glsi08g0174 492 PANTHER CGI-12 PROTEIN-RELATED 179 463 IPR003690 GO:0003690|GO:0006355
Glsi08g0174 492 SMART mt_12 306 338 IPR003690 GO:0003690|GO:0006355
Glsi08g0174 492 SMART mt_12 233 264 IPR003690 GO:0003690|GO:0006355
Glsi08g0174 492 SMART mt_12 412 443 IPR003690 GO:0003690|GO:0006355
Glsi08g0174 492 SMART mt_12 379 411 IPR003690 GO:0003690|GO:0006355
Glsi08g0174 492 SMART mt_12 343 374 IPR003690 GO:0003690|GO:0006355
Glsi08g0174 492 SMART mt_12 269 301 IPR003690 GO:0003690|GO:0006355
Glsi08g0174 492 MobiDBLite consensus disorder prediction 72 88 - -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi08g0174 mTERF 6.1e-43 No_clan