Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0169 ATGATGCCGAGTGTCAACCCGGATCCATCTGACAAAGATTCCGAACCATTCGTTGAAGTTGACCCAACCGGAAGATACGGCCGATACAGTGAGCTTCTGGGATCTGGTGCGGTGAAGAAAGTGTACCGTGCGTTTGATCAAGAAGAAGGCATAGAGGTGGCATGGAACCAGGTGAAGCTCAGGAACTTCGGCGACGACCCAGCCATGGTGGATAGGCTTTACTCTGAAGTGAGATTACTCAGAAGTTTGACCAACAGAAATATCATTGCCCTTTACAATTTCTGGAGGGATGATGAACGAAACACTCTGAATTTCATTACCGAGGTCTGTACAAGTGGGAATTTGAGGGAGTACAGGAAGAAGCACAGGCATGTTTCCATGAAGGCATTAAAGAAGTGGTCTATGCAGATTTTGAAAGGGTTGAATTATCTGCATATGCATGAACCTTGTATCATCCACAGAGATCTCAATTGCAGTAATGTGTTTGTCAATGGGCATATTGGCCAGGTTAAGATTGGTGACTTGGGTTTGGCAGCAATTGTGGGGAAAAACCACTCTGCACATTCAATTCTTGGCACACCAGAATTTATGGCCCCTGAGCTATATGACGAGGACTACACAGAAATGGTGGACATATACTCATTTGGGATGTGTGTGTTGGAGATGGTGACAATGGAGATTCCTTACAGCGAGTGCGACAATGTTGCAAAGATATACAAGAAGGTGTCTTCTGGTGTGAGGCCTCAGGCCTTGAACAAGGTTAGAGATCCAGAGGTGAAGGCATTCATTGAGAGGTGCCTTGCTCAGCCAAGGGCAAGGCCTTCTGCTGCTGAGCTTCTCAGGGATCCTTTCTTTGACGAGATTGATGATGACGAAAATGATGACTCTGTTCCTTCATGA 900 0.46 MMPSVNPDPSDKDSEPFVEVDPTGRYGRYSELLGSGAVKKVYRAFDQEEGIEVAWNQVKLRNFGDDPAMVDRLYSEVRLLRSLTNRNIIALYNFWRDDERNTLNFITEVCTSGNLREYRKKHRHVSMKALKKWSMQILKGLNYLHMHEPCIIHRDLNCSNVFVNGHIGQVKIGDLGLAAIVGKNHSAHSILGTPEFMAPELYDEDYTEMVDIYSFGMCVLEMVTMEIPYSECDNVAKIYKKVSSGVRPQALNKVRDPEVKAFIERCLAQPRARPSAAELLRDPFFDEIDDDENDDSVPS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0169 299 Gene3D Phosphorylase Kinase; domain 1 11 108 - -
Glsi08g0169 299 FunFam Probable serine/threonine-protein kinase WNK1 11 108 - -
Glsi08g0169 299 ProSiteProfiles Protein kinase domain profile. 27 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0169 299 Gene3D Transferase(Phosphotransferase) domain 1 110 291 - -
Glsi08g0169 299 CDD STKc_WNK 25 285 - -
Glsi08g0169 299 FunFam probable serine/threonine-protein kinase WNK9 110 291 - -
Glsi08g0169 299 SUPERFAMILY Protein kinase-like (PK-like) 15 291 IPR011009 -
Glsi08g0169 299 MobiDBLite consensus disorder prediction 1 22 - -
Glsi08g0169 299 Pfam Protein kinase domain 30 285 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi08g0169 299 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 12 288 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0169 Glsi-ChrGlsi08 1488109 1489942 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0169 6 288 MAP Kinase Kinase Kinase AT5G55560 83.392 0.0 507
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Glsi08g0169 Pkinase 3.3e-51 CL0016