Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0163 ATGCACACCCTGCCTCCTATATGTAAGTCATGGGAAGGAGTAAGTGCGAATGAAAAACAGGCTTACATGGCAATGGATGTGTCAAGAATCACCCTGCGGCCATTCAAGCTAAGCGACGTGGATGATTTCATGGTATGGGCGGGAGATGAACGAGTGATGCAGGATACCCGACTGAACACAATTACTTGCAGGGAAGAGGGTTTGGCTTACATAAGAGATGTTTGCATACCTCACCCGTGGCGTCGGTGCATATGCATAAACGAGCGTTCGATTGGGGGTATTTCTGTGTCGCCTTGCTCCGGTGATGACAGATGCAGAGCAGAATTAGGGTATGCTATAGCTGCAAAGTACTGGGGCCAAGGGATTACCACAAAAGCAGTGAAGATGGCTATTTCGCAAGTCTTCAAGGACTTGCCGGATCTGATAAGATTACAGGCTTTCGTTGCCGATGAAAACAAGGTTTCCCAAAGGGTTTTGGAAAAGTCTGGGTTCCTAAGAGAGGGAGGGTCTCCTGAGAAAGTATGCAATCGTCAAGGGCGACATCAAGGATAGCTTCTCTCCACAGCCAAATCGTTTTCATCGACGTCGAGGACCTGGAACAAGGGATCTATGGATACGGTAAGAAGTCTGAAGATCAAGACGAGTACCTGCAAACGCATTGTTAAGGAGCTGCATTCCTATGAGAAGGAAGTTGAGAGAGAAGCTGCCAAAACAGCTGACATGAAGGAGAAAGGAGCTGATCCCTATGACCTTAAACAACAGGAAAATGTACTGGCTGAGTCAAGGATGATGATTCCAGACTGCCGCAAGCGCCTGGAGGCCTCTTTAGCAGACTTAAAAGGAATAGTGGCAGAATTGGAGGAGTCTAACCAGAAGGAAGGCCCTGAAATCGAAGCAGCTCGTAGCACCCTAGCCGAGGTTGAAAAATTATTTGAAACAACTGAAGCTTAG 951 0.4753 MHTLPPICKSWEGVSANEKQAYMAMDVSRITLRPFKLSDVDDFMVWAGDERVMQDTRLNTITCREEGLAYIRDVCIPHPWRRCICINERSIGGISVSPCSGDDRCRAELGYAIAAKYWGQGITTKAVKMAISQVFKDLPDLIRLQAFVADENKVSQRVLEKSGFLREGGSPEKVCNRQGRHQGXLLSTAKSFSSTSRTWNKGSMDTVRSLKIKTSTCKRIVKELHSYEKEVEREAAKTADMKEKGADPYDLKQQENVLAESRMMIPDCRKRLEASLADLKGIVAELEESNQKEGPEIEAARSTLAEVEKLFETTEA 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0163 316 Pfam Tubulin binding cofactor A 206 304 IPR004226 GO:0007021|GO:0007023|GO:0048487
Glsi08g0163 316 ProSiteProfiles Gcn5-related N-acetyltransferase (GNAT) domain profile. 30 193 IPR000182 GO:0016747
Glsi08g0163 316 Pfam Acetyltransferase (GNAT) domain 29 164 IPR000182 GO:0016747
Glsi08g0163 316 Coils Coil 217 244 - -
Glsi08g0163 316 Gene3D - 24 204 - -
Glsi08g0163 316 SUPERFAMILY Tubulin chaperone cofactor A 207 307 IPR036126 GO:0007021|GO:0007023|GO:0048487
Glsi08g0163 316 SUPERFAMILY Acyl-CoA N-acyltransferases (Nat) 28 170 IPR016181 -
Glsi08g0163 316 Coils Coil 269 289 - -
Glsi08g0163 316 PANTHER ACYL-COA N-ACYLTRANSFERASES (NAT) SUPERFAMILY PROTEIN 24 170 - -
Glsi08g0163 316 Gene3D - 205 316 - -
Glsi08g0163 316 FunFam Tubulin-specific chaperone A 204 312 - -
Glsi08g0163 316 Coils Coil 297 316 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0163 Glsi-ChrGlsi08 1433517 1442229 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR GNAT Glsi08g0163 Acetyltransf_3 3.9e-22 CL0257