Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0153 ATGGGTATCTCTCGTGATTCCATGCACAAGAGGCGTGCCACTGGAGGCAAGAAGAAAGCTTGGAGGAAAAAGAGAAAGCAACCAGCTAACACAAAGCTATCAAGCAACAAAACAGTTAGGAGGATTAGGGTTCGAGGTGGAAATGTTAAGTGGCGGGCTTTGAGGCTTGACACTGGAAACTACTCATGGGGGAGTGAAGCTGTGACTCGCAAGACAAGAATTCTTGATGTGGTTTACAATGCATCCAACAATGAGCTGGTTCGTACTCAGACATTGGTTAAGAGTGCTATTGTTCAGGTTGATGCTGCACCTTTCAAGCAGTGGTATCTCCAACATTATGGCGTAGACATTGGTCGCAAGAAGAAGAGTGCAGCTTCTGCCAAGAAGGAAGGGGAGGATGGTGAAACTGCAGCTGAGGAAGTGAAAAAGAGCAACCATGTCCTGAGGAAGTTGGAGAAGCGCCAACAGAACAGGAAACTTGATCCTCATATTGAGGAACAATTTGGAGGTGGTCGTCTATTGGCTTGCATTGCATCCCGACCTGGTCAATGTGGTCGAGCCGATGGGTATCTATTGGAGGGTAAAGAGCTGGAATTCTACATGAAGAAGCTTCAAAGGAAAAAGGGCAAGGGAGCTGGTGCTGCCTAA 648 0.4722 MGISRDSMHKRRATGGKKKAWRKKRKQPANTKLSSNKTVRRIRVRGGNVKWRALRLDTGNYSWGSEAVTRKTRILDVVYNASNNELVRTQTLVKSAIVQVDAAPFKQWYLQHYGVDIGRKKKSAASAKKEGEDGETAAEEVKKSNHVLRKLEKRQQNRKLDPHIEEQFGGGRLLACIASRPGQCGRADGYLLEGKELEFYMKKLQRKKGKGAGAA 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0153 215 PANTHER 40S RIBOSOMAL PROTEIN S8 1 210 IPR001047 GO:0003735|GO:0005840|GO:0006412
Glsi08g0153 215 Pfam Ribosomal protein S8e 5 192 IPR022309 -
Glsi08g0153 215 MobiDBLite consensus disorder prediction 11 30 - -
Glsi08g0153 215 MobiDBLite consensus disorder prediction 1 36 - -
Glsi08g0153 215 NCBIfam ribosomal protein eS8 1 194 IPR001047 GO:0003735|GO:0005840|GO:0006412
Glsi08g0153 215 CDD Ribosomal_S8e_like 5 192 - -
Glsi08g0153 215 Gene3D - 157 210 - -
Glsi08g0153 215 Gene3D - 27 156 - -
Glsi08g0153 215 FunFam 40S ribosomal protein S8 27 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0153 Glsi-ChrGlsi08 1354253 1357078 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0153 1 215 Cytoplasmic Ribosomal Protein Gene Family AT5G59240 82.727 4.37e-122 343