Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0130 ATGGCTTTTAAAGCCATTGATAATTGCTTTCTCACAGCCTATCTCTTACTGGGAATTACAATGTCTTGCACAAGGGCAAAAGTTCCAGCCATTATAGTGTTTGGGGACTCTTCTGTGGATGCAGGGAACAACAACTACATTTCTACGATCTTGAAGAGCAATTTTGCACCTTATGGTCGTGATTTTGACGGTGACCAACCCACCGGGCGTTTCTCCAATGGTCGTCTTGCAACTGACTTCATCTCTGAGGCTTTTGGGATAAAGCCTCTCATTCCTGCATATTTGGATCCAAATTTAAATGTCTCAGATTTTGCTACTGGAGTTTGCTTTGCTTCCGCTGGAACTGGGTTTGATAATGCTACCTCTGATGTGCTATCTGTGATACCTCTATGGAAGGAATTAGAATATTACAAGGAATTCCAGAGGGATCTGAGGAGCTATCTTGGGGAGGAGAGAGCAAACGAGGTTGTGGGTGAAGCATTATACCTAACAAGTGTAGGAACCAATGATTTTCTGTTGAACTATTATGTGCTTCCAAAGAGGTCATTAGAATTCTCGGTAGAAGAATACCAGAAATTCCTAGTAGGAATTGCAGAAGATTTCGTATCAAAGCTTTATGGTCTAGGAGCTAGGAAGATTGCCATTACAGGGCTCCCTCCTATGGGGTGTTTGCCATTAGAGAGAAGCACAAACCTCATTTTTGGGAGTGACTGCGTGGAAGAGTACAACAATGTGGCCAAAGATTTCAATGAAAAACTGGAAGGGTTGGTGTTGAAGATGAACCAGAAACTCTTTGGCATCCGATTGGTGCTTTCAAACCCTTATGACATCCTTTGGAACATCATTCAGAACCCTGATTCTTTCGGATTTGAGGATGTGGAAAGAGCATGTTGTGGAACAGGATTATTTGAGATAAGCTACCTGTGTGATGAGTTGAATCCATTCACTTGTTTGGATGCAAATGATTATGTATTTTGGGATGCCTTCCATCCCACTCAGAAGACTAATTCCATCATTGCTAATGATTTGTTCACTAATTATCTATCTCACTTCCAATAA 1059 0.4145 MAFKAIDNCFLTAYLLLGITMSCTRAKVPAIIVFGDSSVDAGNNNYISTILKSNFAPYGRDFDGDQPTGRFSNGRLATDFISEAFGIKPLIPAYLDPNLNVSDFATGVCFASAGTGFDNATSDVLSVIPLWKELEYYKEFQRDLRSYLGEERANEVVGEALYLTSVGTNDFLLNYYVLPKRSLEFSVEEYQKFLVGIAEDFVSKLYGLGARKIAITGLPPMGCLPLERSTNLIFGSDCVEEYNNVAKDFNEKLEGLVLKMNQKLFGIRLVLSNPYDILWNIIQNPDSFGFEDVERACCGTGLFEISYLCDELNPFTCLDANDYVFWDAFHPTQKTNSIIANDLFTNYLSHFQ 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0130 352 SUPERFAMILY SGNH hydrolase 31 343 - -
Glsi08g0130 352 FunFam GDSL esterase/lipase APG 21 348 - -
Glsi08g0130 352 CDD SGNH_plant_lipase_like 29 347 IPR035669 -
Glsi08g0130 352 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
Glsi08g0130 352 Gene3D SGNH hydrolase 20 348 IPR036514 -
Glsi08g0130 352 PANTHER GDSL ESTERASE/LIPASE EXL3 19 343 - -
Glsi08g0130 352 Pfam GDSL-like Lipase/Acylhydrolase 31 342 IPR001087 GO:0016788
Glsi08g0130 352 Coils Coil 239 259 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0130 Glsi-ChrGlsi08 1196918 1199525 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0130 19 343 Pollen Coat Proteome AT1G75910 34.451 2.88e-62 201