Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0108 ATGTTTTATTTTCTCTGGAAAACCATCCCTTTTCAGAGTCATATTTTCAACAACATTTCTCCATCAACATTGCAAGAACTGCTCTTTGTACAAAATCAATGGTTATCTGTGAGGTACTGTAGTTCAAACACATCAAATGGGCATTCTTTTACAGTCTCGTATCTCGTTAATTCATGTGGATTTTCACCAGAAGAAGCTGCTTCAGCTGCTAAGCGTGTCCACTTTGAAACTCGAGAAAAACCAGATCTGGTGATCAAGTTCTTGGAGAATCAGGGATTCTCACGAACCCAGATTGTTTCGTTCGTAAAAAGCGCACCACATTTACTCCGATATGATCCTGATAAAACTTTTCTTCCTAAGATTGAGTTTTTCAAATCCAGAGCTGTTTTGAGTTCAGACATCCCTAGGCTTATATCTGGTTGCCCATCCATTCTGTCTAGAAGCTTAACGAACCAACTTATTCCTTCCTTTGATTTCTTTCAAAATTTGTTTCAATCTGATGACAAAGAGCAGTTCTTGCAATGTTGA 528 0.3807 MFYFLWKTIPFQSHIFNNISPSTLQELLFVQNQWLSVRYCSSNTSNGHSFTVSYLVNSCGFSPEEAASAAKRVHFETREKPDLVIKFLENQGFSRTQIVSFVKSAPHLLRYDPDKTFLPKIEFFKSRAVLSSDIPRLISGCPSILSRSLTNQLIPSFDFFQNLFQSDDKEQFLQC 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0108 175 SMART mt_12 99 130 IPR003690 GO:0003690|GO:0006355
Glsi08g0108 175 SMART mt_12 135 167 IPR003690 GO:0003690|GO:0006355
Glsi08g0108 175 Pfam mTERF 85 170 IPR003690 GO:0003690|GO:0006355
Glsi08g0108 175 Gene3D Transcription termination factor 3, mitochondrial 48 173 IPR038538 -
Glsi08g0108 175 PANTHER CGI-12 PROTEIN-RELATED 46 170 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0108 Glsi-ChrGlsi08 1020764 1021291 Dispersed/Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Glsi08g0108 mTERF 2.4e-13 No_clan