Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0093 ATGGCGAATTTGCCCCAATCGCTCTCCATGAATGCGCCGTTCGGAGCTCCTGGTGCCTCCGCCCAAAATGCCGCCGCTAATCAGGCCAACAAGGATCGCCAGATGGCGACTGCAGAGCACCTGGTTCTCGAACTAAGTAACCCTGATCTCCGAGAAAATGCTCTTCTCGAGCTCTCCAAGAAGAGAGAGTTGTTTCCGGATCTCGCTCCATTACTGTGGAATTCTTTTGGTACTATTGCAGCACTTTTACAGGAGATAGTTTCAATATACCCTGTTCTTTCACCTCCAAATCTTACTCCACCGCAATCAAATCGAGTTTGCAATGCTCTTGCTCTTCTTCAGTGTGTGGCTTCTCACCCGGATTCAAGGATGCTATTCCTCAATGCTCATATACCTCTATATCTATACCCCTTCCTAAATACAACAAGCAAGTCAAAACAGTATGAGTATTTGAGGCTTACCAGTCTTGGTGTCATTGGTGCCTTGGTGAAGGTTGATGATACAGAAGTTATAAGTTTTCTTCTTTCAACGGAGATAATTCCACTCTGTCTGCGCACCATGGAAATGGGTAGTGAACTATCCAAAACGGTTGCAACATTTATAGTTCAAAAGATTCTGTTGGATGACGTGGGCTTGGATTATATTTGTACTACAGCAGAGCGCTTTTTTGCAGTAGGTCGAGTTTTGAGGAACATGGTAGCAGCTCTTGCTGAGCAACCCTCATCTCGTCTGTTGAAACATATCATTCGATGTTATCTCCGTCTGTCAGATAATCCAAGGGCTTGTGATGCATTAAGTAGTTGTCTTCCAGACATGTTAAGAGATGCTACTTTCAGCAGCTGCCTGCGTGAAGACCCAACAACCAGGAGGTGGCTACAACAATTACTTCACAATGTTGGAGTGAATCGGGTTCCTGCTCTACAAGGTGGAGGAGGTTTCGATCATATGATGGTGTCGTGA 960 0.4531 MANLPQSLSMNAPFGAPGASAQNAAANQANKDRQMATAEHLVLELSNPDLRENALLELSKKRELFPDLAPLLWNSFGTIAALLQEIVSIYPVLSPPNLTPPQSNRVCNALALLQCVASHPDSRMLFLNAHIPLYLYPFLNTTSKSKQYEYLRLTSLGVIGALVKVDDTEVISFLLSTEIIPLCLRTMEMGSELSKTVATFIVQKILLDDVGLDYICTTAERFFAVGRVLRNMVAALAEQPSSRLLKHIIRCYLRLSDNPRACDALSSCLPDMLRDATFSSCLREDPTTRRWLQQLLHNVGVNRVPALQGGGGFDHMMVS 319
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0093 319 Pfam Cell differentiation family, Rcd1-like 41 299 - -
Glsi08g0093 319 Gene3D - 29 300 IPR011989 -
Glsi08g0093 319 PANTHER UNCHARACTERIZED 28 302 IPR007216 GO:0006402|GO:0030014
Glsi08g0093 319 FunFam Cell differentiation protein RCD1 31 302 - -
Glsi08g0093 319 SUPERFAMILY ARM repeat 43 272 IPR016024 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Glsi08g0093 Glsi-ChrGlsi08 789852 796635 Dispersed/Wgd
       

Transcription factors information


Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Rcd1-like Glsi08g0093 Rcd1 6.9e-128 No_clan