Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0064 ATGCCTCACCACATTGTGGACCGCGTTCGACGTACGCTTTCTCAAGCTTTCTTAGCCTTCAGTTGCTTTTGGGTCCTCAGAGTTCCTCCAGCAAGGTACATGGTTGAGTTGGAAGTTCAGATCCCCACTCCTTTTGATCCATTTGCAGAGGCCAAAGAATCGAATGCTCCGGGGGGGAAAGGGTATGTGCATATAAGAATTCAACAGAGGAATGGAAAGAAGAGCCTAACCACAGTGCAAGGGCTGAAGAAGGAATTCAGCTACCAGAAGATCCTCAAAGACCTCAAGAAAGAGTTCTGCTGCAACGGGAATGTTGTGCAGGATAAGGAGCTGGGCAAGATAATCCAACTCCAAGGTGATCAGCGCAAGAACGTCTCCCAGTTCCTGGTTCAGGCTAGCCTTGTCACTAAGGACCAGATCAAGATTCATGGTTTTTGA 438 0.4817 MPHHIVDRVRRTLSQAFLAFSCFWVLRVPPARYMVELEVQIPTPFDPFAEAKESNAPGGKGYVHIRIQQRNGKKSLTTVQGLKKEFSYQKILKDLKKEFCCNGNVVQDKELGKIIQLQGDQRKNVSQFLVQASLVTKDQIKIHGF 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0064 145 SUPERFAMILY eIF1-like 34 145 IPR036877 GO:0003743|GO:0006413
Glsi08g0064 145 Pfam Translation initiation factor SUI1 61 132 IPR001950 GO:0003743|GO:0006413
Glsi08g0064 145 NCBIfam translation initiation factor SUI1 39 145 IPR005874 GO:0003743
Glsi08g0064 145 ProSiteProfiles Translation initiation factor SUI1 family profile. 63 133 IPR001950 GO:0003743|GO:0006413
Glsi08g0064 145 CDD eIF1_SUI1 61 144 IPR005874 GO:0003743
Glsi08g0064 145 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 39 145 - -
Glsi08g0064 145 Gene3D - 31 145 - -
Glsi08g0064 145 FunFam Eukaryotic translation initiation factor SUI1 35 145 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0064 Glsi-ChrGlsi08 593705 595781 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0064 34 145 Eukaryotic Initiation Factors Gene Family AT5G54940 81.250 4.86e-66 194
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi08g0064 08 593705 595781 Glsi08g0064 08 593705 595781 ECH