Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0053 ATGAAAAGAACAGCAACAATGAGAGTATCATCAAAATTCATCAATCTTGATGATTTTGATTTTCAAATCATCGAAGAACCCGAGTTTCCATTGGAGTTCATAGGAGAGATTGAAGACATGGGCGGTTATGAGACAAAGCTAGTAATAGAAAAGCACCTATGTGAAGGAGATTTAAAGTCATTATCTATCCGAGAAGCCGTGGACTTTGTGAGAGAGGAAGAATTGGAGTTGTTAGAGTTTGGTGGAATGCCCGTGTTGGTAGTGGATCCTTGTCTGAGGGAGTTCAATCTGACCTTGAAGAAGGGGAAGAAAAGGGGACGCTCAGTTTATAAGCTGGTCGACCATTGGAATAGCATTGTGCAGCTAAATGAACTTAAACCCAGCGACAAGGTGCAGTTATGGTCTTTCAGAAACATTTATGACGAACTGTGTTTCGCGCTAGTCAAGCTTCACCAAGAATCAGTAGTCAATTAA 474 0.4093 MKRTATMRVSSKFINLDDFDFQIIEEPEFPLEFIGEIEDMGGYETKLVIEKHLCEGDLKSLSIREAVDFVREEELELLEFGGMPVLVVDPCLREFNLTLKKGKKRGRSVYKLVDHWNSIVQLNELKPSDKVQLWSFRNIYDELCFALVKLHQESVVN 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0053 157 PANTHER B3 DOMAIN PLANT PROTEIN-RELATED 23 152 IPR005508 GO:0003677
Glsi08g0053 157 SUPERFAMILY DNA-binding pseudobarrel domain 49 139 IPR015300 -
Glsi08g0053 157 Gene3D - 39 152 IPR015300 -
Glsi08g0053 157 Pfam B3 domain-containing protein At2g31720-like 38 121 IPR005508 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0053 Glsi-ChrGlsi08 508441 508914 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0053 37 147 B3 DNA Binding Superfamily AT1G05930 27.559 6.08e-06 43.1