Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0051 ATGGAAAAGGTTGTTATCTTCATTGCCACTAAAGTCTTAGAATATTCGGTGGATCCAGTAATACGTGAAGGGCGTTACTTGTTTCGTGTCAGCAAAATCACCAAAACCCTTGAGAATGAAAAGGTGAAGCTGACACTAACAAGAGATGGTGTGTATCAACGTGTGGAAGAAGCTAAGAAGAAAACTGAGAGTATAGAAGATGTTGTAGAAAAGTGGCTGCATGAAGTGCAAAATCTCCTGGCAGAGGTGGAGAATTTAGAAAAAGAATTGACAGCAAACAGTTGCACTCGAGGATTGTGTCCTACCTGGAGAAGATATCGTTTGTGCAAGCAATTGGCTAAGAAGGTAGAGATAATGGCAGAGCTCAACGATAAAAGCAAGTTTGAGCGATTTTCTCACCTTGCTAATCTTCCCAGCATTGAATACTTCCCTTCAGGAAACTTCACATGTTTTGAATCTACAAAATTGGCTTACGATCAACTTTTGGAGGCAATAAGAGACGATGGCTGCTATATGATAGGCTTGTATGGGATGGGAGGATGTGGAAAAACAACCCTTGTAAAAGAAGTGGGCAAACGAGCTAAGGATTTGAATGTCTTCGATCAAGTTGTATTTACTACTGTGTCCCAAACTCCAAATATTAGAAGGATTCAAGGTGAAATTGCTGATTTGTTGGGTCTGAAATTAGATGAAGAAAGCGAAGGAGGGAGGGCAAGACGGTTGTCATTGAGATTGCGAAGCGCGGAAAGGATTCTTGTTATATTGGATGATGTTTGGGCAAAGCTGAAGCTGGAGGATATAGGGATTCCTTTAGATGGTAATCTCAAAGCCTGCAAGGTCCTTCTAACTACACGGCTCCGACAATTATGTACTTTGATGGACTGTCAAAGGAATGTTCCACTTTTCCTCTTATCAGAAAAGGATGCTTGGATTTTGTTTCGAAAGCATGCATGCGTAGTTGATGAATCTTCCTCCAGGTTCTTAAATATTGTGGCACGAGAAGTTGCTATGGAATGTAAAGGACTACCTATTGCTATTGAAGCTGTGGGAACATCTTTGAAAGGAAAATCTCTTGATGAGTGGAAGGTAGCATTAGATAAATTAAGGCATTCGAAACCTATTGATGTAGAAGAAGGAATGAGAGATGCTTTTGCTTGTCTTCAATTAAGCTATGATTATTTGAAAAGCAAAGAAGCAAAGTTTCTTTTCCTGATGTGTAGTATGTTTCCAGAAGATCATGAGATTTCTGTGGAAGATTTGTTCAGATACGGAATAGGGCTGGGCCTATGTGCAGAAGTTGATTCATTTGAAATATCAAGGAGCCAAGAGGATAAGCCCCTTCCATATGGAGTGGTAATTAAGTTTAGTACTCTCACCAAACACATTAAGGATAACTCGAACCCAAGAGAGAGAGAGAGTGGTGACAATGTGACAGTGTTCATTGAAATAACTCTTAACAGGGAATTGCAGTCACTTGTGATACATGACGGCCAAGTCTGTAATGAAGTTTCAAATCTGCAAGCTTCTTCAAATGCTATAAAACAATTACCTATTGATGAAGAAAAAGAGAAGATCTTGACCTCAAGTGTGGAATGGTTGCATTTGGAGCATTTACCTGACCTCATGTTTATATGGATCAGCTTCCAAAATATTGACATCCTAGAAGTGCGTATATTGTGCTCACACTCATATGCCATGGTTCCTAATGATAACTTGGGGGTTGCTAAAGATGCACTACACCACAACCATCCCTCCCAGCTAAAGAACAGTTATTACAAGCTTTTGAGGAACATGCTCTACCAAGAGAGAGCTCCCCGCTCCCAATTTTTGGGCGGTATTTGTGTTGGTCTTGGGCGTGCGAAGCGGAGAAAATTCTCTTTACCGTCATCGCCTGCAAAATGTAAAGTGCAAATTCCAAATGTTTCTAGATTCGCCTGTTCGTCTTTCTCATCCAAAAAAAAACCCAATCGAAAAGAATCAGTAATTGGAGGTGAAGCTTAG 2001 0.4033 MEKVVIFIATKVLEYSVDPVIREGRYLFRVSKITKTLENEKVKLTLTRDGVYQRVEEAKKKTESIEDVVEKWLHEVQNLLAEVENLEKELTANSCTRGLCPTWRRYRLCKQLAKKVEIMAELNDKSKFERFSHLANLPSIEYFPSGNFTCFESTKLAYDQLLEAIRDDGCYMIGLYGMGGCGKTTLVKEVGKRAKDLNVFDQVVFTTVSQTPNIRRIQGEIADLLGLKLDEESEGGRARRLSLRLRSAERILVILDDVWAKLKLEDIGIPLDGNLKACKVLLTTRLRQLCTLMDCQRNVPLFLLSEKDAWILFRKHACVVDESSSRFLNIVAREVAMECKGLPIAIEAVGTSLKGKSLDEWKVALDKLRHSKPIDVEEGMRDAFACLQLSYDYLKSKEAKFLFLMCSMFPEDHEISVEDLFRYGIGLGLCAEVDSFEISRSQEDKPLPYGVVIKFSTLTKHIKDNSNPRERESGDNVTVFIEITLNRELQSLVIHDGQVCNEVSNLQASSNAIKQLPIDEEKEKILTSSVEWLHLEHLPDLMFIWISFQNIDILEVRILCSHSYAMVPNDNLGVAKDALHHNHPSQLKNSYYKLLRNMLYQERAPRSQFLGGICVGLGRAKRRKFSLPSSPAKCKVQIPNVSRFACSSFSSKKKPNRKESVIGGEA 666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0051 666 Coils Coil 55 96 - -
Glsi08g0051 666 PRINTS Disease resistance protein signature 172 187 - -
Glsi08g0051 666 PRINTS Disease resistance protein signature 245 259 - -
Glsi08g0051 666 PRINTS Disease resistance protein signature 339 353 - -
Glsi08g0051 666 PANTHER NB-ARC DOMAIN-CONTAINING PROTEIN-RELATED 35 589 - -
Glsi08g0051 666 Pfam NB-ARC domain 162 392 IPR002182 GO:0043531
Glsi08g0051 666 Gene3D - 144 299 IPR027417 -
Glsi08g0051 666 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 143 406 IPR027417 -
Glsi08g0051 666 Gene3D - 303 395 IPR042197 -
Glsi08g0051 666 FunFam Probable disease resistance protein At1g61300 151 298 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0051 Glsi-ChrGlsi08 492612 500514 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0051 173 406 WRKY Transcription Factor Family AT5G45050 28.631 1.80e-08 56.2