Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi08g0030 ATGATTTGCTCCGTGAAACAACCTAGTATTGCGATCAGTGGTTCTTCTGATGCCATTTTCCGGAGAAAAATCTCAATCCCAGTTCAGGTATCTTCGTCTTTTCCTTCTCTTCCCAGATTAAAACCTCAGAGATCTCTGGTTTCTGTGCAAAAACCGTTGCTGCACCTTTCTTCTTTCGGGAATTTTGATTCAGTGAAAACCCAACTACACAATTTGATCACATGTAAAGCATACGAGGCAGAGCGATCAAACATTGAAACAAGCACACCATCAGAGGCAGCTAGGAAGTTGAAAATTGGAATATACTTTGCAACCTGGTGGGCTCTGAATGTGGTCTTTAATATTTATAACAAGAAGGTTCTGAATGCATATCCGTACCCCTGGCTTACTTCCACTCTCTCACTTGCATGTGGGTCTCTTATGATGTTGATCTCTTGGGCCACGAGGATAGCCGAGGCACCTAAGACCGATCTTGAGTTTTGGAAGACCTTGTTTCCTGTTGCTGTTGCACATACCATAGGTCATGTAGCAGCAACTGTTAGCATGTCAAAAGTTGCTGTTTCATTCACCCATATTATTAAGAGTGGTGAGCCTGCATTTAGTGTCCTGGTTTCGAGATTTCTTTTGGGTGAGACCTTCCCAGTGCCAGTCTATTTGTCCTTGATTCCGATCATCGGTGGATGTGCTCTTGCTGCTGTCACTGAGCTCAATTTCAATATGATTGGTTTTATGGGAGCTATGATATCAAATTTGGCATTTGTATTTCGGAATATCTTTTCAAAAAGGGGCATGAAGGGAAAGTCTGTTAGTGGAATGAACTACTACGCTTGTTTGTCAATGATGTCCCTCTTAATTCTCACACCGTTTGCTTTTGCTGTGGAGGGACCTCAGATGTGGGCAGCCGGATGGAAAACAGCCCTCTCGCAAATTGGCCCCCAATTCATATGGTGGGTGGCAGCCCAGAGCGTGTTCTATCATCTGTACAACCAGGTGTCGTATATGTCTCTTGACCAGATCTCTCCCTTGACATTTAGCGTAGGAAACACCATGAAACGCATATCTGTCATAGTCTCCTCCATCATTATCTTCCACACGCCAGTTCAGCCTGTCAATGCTCTTGGAGCTGCTATCGCTATCCTTGGAACCTTCTTGTATTCGCAGGCAAAACAGTAG 1173 0.4416 MICSVKQPSIAISGSSDAIFRRKISIPVQVSSSFPSLPRLKPQRSLVSVQKPLLHLSSFGNFDSVKTQLHNLITCKAYEAERSNIETSTPSEAARKLKIGIYFATWWALNVVFNIYNKKVLNAYPYPWLTSTLSLACGSLMMLISWATRIAEAPKTDLEFWKTLFPVAVAHTIGHVAATVSMSKVAVSFTHIIKSGEPAFSVLVSRFLLGETFPVPVYLSLIPIIGGCALAAVTELNFNMIGFMGAMISNLAFVFRNIFSKRGMKGKSVSGMNYYACLSMMSLLILTPFAFAVEGPQMWAAGWKTALSQIGPQFIWWVAAQSVFYHLYNQVSYMSLDQISPLTFSVGNTMKRISVIVSSIIIFHTPVQPVNALGAAIAILGTFLYSQAKQ 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi08g0030 390 NCBIfam Tpt phosphate/phosphoenolpyruvate translocator 97 389 IPR004696 GO:0016020|GO:0022857|GO:0055085
Glsi08g0030 390 Pfam Triose-phosphate Transporter family 97 386 IPR004853 -
Glsi08g0030 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 141 233 - -
Glsi08g0030 390 SUPERFAMILY Multidrug resistance efflux transporter EmrE 290 387 - -
Glsi08g0030 390 PANTHER SOLUTE CARRIER FAMILY 35 98 389 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi08g0030 Glsi-ChrGlsi08 348981 352592 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi08g0030 1 389 Antiporters AT5G54800 76.923 0.0 575