Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2232 ATGGCTGCTTGTGCTTTGCTCACTAGTGGCAGTGATAGAGCTGATGCCGACGGCAATGTCAGCAACGCAAGCAATGTGAATGCCCGTGGTGGAAGTGCAAGTCCTCTCACCAGTGCCTCCAACTCCAGTGAAGATTACACTTTGCACTGTCGTCCCCCCTCTGAAAGAAAGATGGTGAGGAAGAGATTGGCCTCTGAAATGGAAGTTCACACCTCCCCCGCCGACTCCGCCAGTGATTATCCCAGGTTTCCCCGTCGAAGTGTAGCCGTCAGCGCCACCTCCACGTTGAATTGCTCTTTACCCGCTGTGGAAAAAGCAACTACTTATAACTATCATTATAACTCTTCACGAGATAATGTTCCTATTCCAAACCCCACTGTGACGCTCCCCAACTACTCCACTATGCTCCTACCTTCGTCCACGAATCTGACCACCATGACGTCAAGCGGCTATTCCTCTGGGTCTTTACCGTCTATTCCGAACTACAGTCACCGTCATTGCGGAGAAAGCCTCTCGCTTCATCATCATTTTCAAGGACTTCAGCCCCAAAGCCACACTCAGAACCCCAACCCCGCGCCTGCAGTCTGTGGGTTTTCGGGTTTGCCACTTTTTCCATCTGAAAGAAATCGAGATAATATCAGGAACACCAGCGGTGCTACTGTGGACGTTGTTGCTTCTGCGACAAGCACCGATATCGGCCGACCTTCTCCTTCTATGGAAGACACCTCGGCCACAGCTTGGATCGACGGCATCTTAAAGGATCTTATCCATAGCTCCACTGCCGTCTCCATTCCTCAGCTCATCAACAACGTGAGGGAGATTATCTATCCTTGCAACCCCAACCTGGCTGTCGTTCTTGAACACAGACTGCGCCTGCTCTCGTCGGCGACTGACACCATCCCAAACTATGCAGAGAAGAAAAGGACGGAAGGGCTGCCTGTGGTGGCCGTGAGTTTGAACCAGAGGCCCTTGAGTCAGCAAGTGGGGCCCTCTTCCGAGTTGAAGGTGAGTCGGATGGATGACATTGTCGTTCCCAATTTGCATTTTCCAAATTCAACTGTCGCCGGTTTGAATCAGATGTACTCAAACTGGGGAGTGCCTCCGGTTACTGCCCTAACCCACGACGGGGGCAACCCTTCTGTGGTTTCGCTACCGCCATCTCCGCTATCATCATCAAATCATCAGGGTTATTCGCCACTGCAAGAGCAGCAATTTCATGAGAAGCAGCAACATGCGAATCACAATAATCAACAAGAAGGGGGCTCTTCCCCTTCTGATAATCGAGCATCAACAACGGCTTCGGCTGCAGAAATCATCCTAACAAGAAAGAAGAAAGAGGAGATGCGGCAACAGAAGAGAGATGAAGAGGGTTTACACCTCCTCACTTTGCTCCTTCAGTGTGCGGAGGCTGTGTCAGCTGATAACTTGGAAGAAGCTAATAAGATGTTGTTAGAGATTTCGCAACTCTCCACACCATTCGGTACGTCTGCGCAGCGGGTGGCAGCTTATTTCTCCGAAGCCATATCGGCAAGGCTGGTAAGCTCGTGCTTGGGAATATATGCTACTCTGCCAACGGTGCCCCATAGCCAAAAGATGGTTTCGGCTTTCCAGGTGTTCAATGGCATTAGTCCTTTCGTGAAGTTCTCACACTTCACGGCAAACCAAGCTATACAGGAAGCGTTTGAAAGGGAGGAGAGAGTGCACATCATAGATCTAGATATAATGCAGGGGTTGCAGTGGCCTGGCCTATTTCACATTCTGGCTTCAAGAGCCGGTGGACCCCCTTACGTGAGACTCACGGGCCTTGGCACCTCCATGGAGGCTCTGGAGGCTACCGGGAAGCGCTTGTCTGACTTTGCGAATAAACTGGGACTTCCCTTCGAGTTCTTTCCGGTGGCTGAGAAAGTGGGCAACCTGGACCCAGAGAGGCTCAGTGTGAGCAAGACAGAAGCTGTTGCCGTCCACTGGTTGCAACATTCTCTCTACGATGTCACTGGCTCCGATACAAATACGCTGTGGCTTTTGCAGAGGCTGGCGCCTAAAGTGGTGACGGTGGTGGAGCAGGACCTGAGCCACGCGGGTTCTTTCTTGGGTAGGTTTGTGGAAGCCATACACTACTACTCCGCACTATTCGATTCCCTTGGATCTAGCTATGGCGAGGAAAGTGAGGAGAGACATGTGGTGGAGCAGCAACTTCTGTCCAGGGAGATTCGTAACGTACTGGCCGTTGGGGGTCCATCAAGGACCGGAGAGCTGAAGTTCCACAACTGGAGGGAAAAGTTTCAGCAGTGTGGATTCAGAGGCGTCTCTCTCGCTGGTAATGCTGCCACACAGGCCAGCTTACTCCTTGGCATGTTTCCATCTGACGGCTATACCTTGGTGGAGGACAATGGCACCCTCAAACTTGGCTGGAAAGACCTTTGCTTGATCACTGCTTCTGCTTGGAGACCCCCCTTCCACAATGCCAGTGCCATCACCGATAGTTAA 2487 0.5171 MAACALLTSGSDRADADGNVSNASNVNARGGSASPLTSASNSSEDYTLHCRPPSERKMVRKRLASEMEVHTSPADSASDYPRFPRRSVAVSATSTLNCSLPAVEKATTYNYHYNSSRDNVPIPNPTVTLPNYSTMLLPSSTNLTTMTSSGYSSGSLPSIPNYSHRHCGESLSLHHHFQGLQPQSHTQNPNPAPAVCGFSGLPLFPSERNRDNIRNTSGATVDVVASATSTDIGRPSPSMEDTSATAWIDGILKDLIHSSTAVSIPQLINNVREIIYPCNPNLAVVLEHRLRLLSSATDTIPNYAEKKRTEGLPVVAVSLNQRPLSQQVGPSSELKVSRMDDIVVPNLHFPNSTVAGLNQMYSNWGVPPVTALTHDGGNPSVVSLPPSPLSSSNHQGYSPLQEQQFHEKQQHANHNNQQEGGSSPSDNRASTTASAAEIILTRKKKEEMRQQKRDEEGLHLLTLLLQCAEAVSADNLEEANKMLLEISQLSTPFGTSAQRVAAYFSEAISARLVSSCLGIYATLPTVPHSQKMVSAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGLFHILASRAGGPPYVRLTGLGTSMEALEATGKRLSDFANKLGLPFEFFPVAEKVGNLDPERLSVSKTEAVAVHWLQHSLYDVTGSDTNTLWLLQRLAPKVVTVVEQDLSHAGSFLGRFVEAIHYYSALFDSLGSSYGEESEERHVVEQQLLSREIRNVLAVGGPSRTGELKFHNWREKFQQCGFRGVSLAGNAATQASLLLGMFPSDGYTLVEDNGTLKLGWKDLCLITASAWRPPFHNASAITDS 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2232 828 MobiDBLite consensus disorder prediction 414 432 - -
Glsi07g2232 828 ProSiteProfiles GRAS family profile. 451 816 IPR005202 -
Glsi07g2232 828 Pfam GRAS domain family 461 816 IPR005202 -
Glsi07g2232 828 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 419 812 IPR005202 -
Glsi07g2232 828 MobiDBLite consensus disorder prediction 14 48 - -
Glsi07g2232 828 MobiDBLite consensus disorder prediction 7 50 - -
Glsi07g2232 828 MobiDBLite consensus disorder prediction 383 406 - -
Glsi07g2232 828 MobiDBLite consensus disorder prediction 377 432 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2232 Glsi-ChrGlsi07 67464459 67467228 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2232 442 817 GRAS Transcription Factor Family AT3G54220 87.105 0.0 674
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Glsi07g2232 GRAS 2e-125 CL0063