Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2204 ATGATGCTACAGTCCTACTTTGCTACAATACCTACTTTTCTACTCCTGCTTTTCTTTTTGCAAACTCTGGCCGATCTAAATGCAGAAAAGCAAGCCCTCCTTGATTTTGCTGCTGCAGTTCATCATGGTCATGCCCAAAGAGTCAATTGGAACCCAGCTACCTCAATCTGCTCTTCTTGGGTGGGAATCACCTGCAGCCCCAGTGGTTCCCATGTGCTTGCTGTGCGGCTTCCTGCTGTTGGACTTCGCGGTTCTCTCCCAGCCAATACACTTGGTAAGTTGGATGGTCTCAGAATTCTCAGTCTTCGGTCCAACAGCCTGACTGGAAATCTTCCATCTGATATACTTTCCCTTCCTTCCCTCAGCTTTATACATTTGCAACACAACAACTTTTCAGGTGATATTCCTAATTCTTTGTCTCACAACCTTAAGTTTCTTGATCTGTCCTACAACTCTTTTACTGGAAAAATTCCAGCCTTAATTTCAAACTTGACTTATCTAACTGGATTGAACCTCCAAAAGAACTCTCTAAGGGGACCAATCCCTGATTTAAACCTTTCAAAGCTCAAGAATTTAAATTTGAGCTACAACAACCTCAGTGGTTCAATTCCCTCAGCCCTCCGTAACTTTCCTGTCTCCTCATTTCAAGGGAATCTGATGTTATGTGGACCACCTTTACACCATTGTTCTTCAGTTTCCCCTTCTCCTTGCCCCTTTCCCACAATGTCTCCATCAACAGTCTCTTCAGGGCCAGGTCATCTATCCAACAAGAAGCTGAGTACAGGGGCTATAATTGCAATTGCTATTATAGGTTTTGTACTGCTGTTTCTTCCATTTTTTATAGTAGTGTTGTGCTGTCTCAAGAAAAAAGATGGTGAACATAATGTAGCACCTAAAGGGAAGGATGAGAAGCTTAGGGAGGACTTTGGAAGTGGAGTGCAAGAACCTGAGAAAAACAAGCTAATATGTTTTGAAGGTTGTTCTTATAGTTTTGATCTTGAGGATCTATTAAGAGCTTCTGCTGAAGTGCTTGGGAAGGGAAGCTGTGGGACGACTTATAAAGCCATCTTAGAGGAGGGGACTACGGTGGTTGTGAAGAGGTTAAAAGAAGTGGTAGTAGGGAAAAAAGAATTTGAGCAGCAAATGGAGAATGTGCAAAGGCTTGGTCAGCACCCTAATGTTATTCCTATTCGTGCTTACTACTATTCCAAAGATGAAAAACTACTGGTTTATGATTACATGACAGCTGGTAGCTTCTCCAAACTATTGCATGGAACCAGGGAAACTGGACGAACTCCACTAGATTGGGAATCCAGACTGAAGATCTCACTTGGAGCTGCTAAGGGAATTGCCCATATCCACTCTGCCAGCGGGAGGAAATTTGTCCATGGCAATATAAAATCATCTAATGTGCTTCTCACTGTAGATCTTCAAGGCTGCATATCCGATTTTGGCTTAACTCCTCTAATCAGTTCCTCTGTCCCCTCCAGGAGTCCAGGTTACCGAGCACCCGAGGTTATTGAAACCCGAAAATCTTCCCAAAAGTCTGATGTTTATAGCTTTGGTGTTGTCCTTCTTGAGATGCTGACTGGCAAAACACCAGTTCAGTATTCAGGGCATGACGATGTGGTAGATCTTCCAAAGTGGGTGCAATCTGTTGTTCGGGAGGAATGGACCGCCGAAGTGTTTGATCTTGAGCTAATGAGGTATCCAAATATTGAAGAAGAACTGGTGCAAATGCTGCAACTAGCAATGGCATGTGTAACAAGGCCACCTGACACGAGACCTTCGATGGAGGAAGTCGTTAGAATAATTGACGATATCAGAGCATCCAATTCTGAGAACCAGCCATCATTCTCAGAGGACAAGGCCATGGAGATGGGGTCCCCTTCTTTCACCCCATATAATTAG 1911 0.4369 MMLQSYFATIPTFLLLLFFLQTLADLNAEKQALLDFAAAVHHGHAQRVNWNPATSICSSWVGITCSPSGSHVLAVRLPAVGLRGSLPANTLGKLDGLRILSLRSNSLTGNLPSDILSLPSLSFIHLQHNNFSGDIPNSLSHNLKFLDLSYNSFTGKIPALISNLTYLTGLNLQKNSLRGPIPDLNLSKLKNLNLSYNNLSGSIPSALRNFPVSSFQGNLMLCGPPLHHCSSVSPSPCPFPTMSPSTVSSGPGHLSNKKLSTGAIIAIAIIGFVLLFLPFFIVVLCCLKKKDGEHNVAPKGKDEKLREDFGSGVQEPEKNKLICFEGCSYSFDLEDLLRASAEVLGKGSCGTTYKAILEEGTTVVVKRLKEVVVGKKEFEQQMENVQRLGQHPNVIPIRAYYYSKDEKLLVYDYMTAGSFSKLLHGTRETGRTPLDWESRLKISLGAAKGIAHIHSASGRKFVHGNIKSSNVLLTVDLQGCISDFGLTPLISSSVPSRSPGYRAPEVIETRKSSQKSDVYSFGVVLLEMLTGKTPVQYSGHDDVVDLPKWVQSVVREEWTAEVFDLELMRYPNIEEELVQMLQLAMACVTRPPDTRPSMEEVVRIIDDIRASNSENQPSFSEDKAMEMGSPSFTPYN 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2204 636 Gene3D Transferase(Phosphotransferase) domain 1 414 629 - -
Glsi07g2204 636 Pfam Protein kinase domain 341 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g2204 636 SUPERFAMILY Protein kinase-like (PK-like) 342 604 IPR011009 -
Glsi07g2204 636 FunFam Leucine-rich repeat receptor-like protein kinase 144 229 - -
Glsi07g2204 636 PANTHER OS05G0588300 PROTEIN 13 617 - -
Glsi07g2204 636 CDD STKc_IRAK 344 608 - -
Glsi07g2204 636 Gene3D Ribonuclease Inhibitor 185 230 IPR032675 -
Glsi07g2204 636 ProSiteProfiles Protein kinase domain profile. 338 619 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g2204 636 Gene3D Phosphorylase Kinase; domain 1 307 413 - -
Glsi07g2204 636 SUPERFAMILY L domain-like 28 227 - -
Glsi07g2204 636 Pfam Leucine Rich Repeat 142 164 IPR001611 GO:0005515
Glsi07g2204 636 Pfam Leucine Rich Repeat 188 210 IPR001611 GO:0005515
Glsi07g2204 636 MobiDBLite consensus disorder prediction 612 636 - -
Glsi07g2204 636 Gene3D Ribonuclease Inhibitor 26 184 IPR032675 -
Glsi07g2204 636 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 414 619 - -
Glsi07g2204 636 FunFam Leucine-rich repeat receptor-like kinase 28 143 - -
Glsi07g2204 636 FunFam pollen receptor-like kinase 1 307 413 - -
Glsi07g2204 636 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2204 Glsi-ChrGlsi07 67230473 67232761 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2204 13 624 Receptor kinase-like Gene Family AT5G58300 61.364 0.0 747
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi07g2204 Pkinase 2.4e-37 CL0016