Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2199 ATGAGGAACATCGGTCGTTGGTGTGTTCCGTTCTTTCTTTGCTTGCTCATAGCTATTCAGCTTGTTGGAGCTGCGGATTTTGTGCCCACGGATAAGATACTCTTGAGTTGTGGGGGGCCTCCAGATTCAACCGATGACGATGGCCGGAAGTGGACTACTGATACTGGCTCCAAGTTTACATCTTCGGCTGGAAAATCTATCGCATCATCTGCTGCAACTCAAGACCCTGCGGTACCTGACGTTCCATATATGACTGGCCGGGTATTTCCATCAGAATTCACCTACAGTTTTCCAGTGGCCCCAGGTCGCAAATTTCTCCGTCTCTACTTTTATCCGGCTTCTTATTCTGGGCTTAATGCATCTAATGCTCTCTTCTCTGTCGCTGCCCAATCCTACACTCTTCTTAGGAACTTCAGTGTTGCTCAAACCACTGCTGCTTTGAATTATGCCTTCATTGTTAAGGAATACTTGATCAATGTTGATGATAAAACCCTGAATGTTACTTTTACTCCATCTACCAAGGCTTCAAATGCTTATGCATTTGTTAATGGGATCGAGATTGTGTCCATGCCTGACATTTATAGTTCCACTGATGGGACAATGATTGTGGGTGAAGGTACTCCTTTTCCCATTGACAACAGCACTGCACTGGAGAATGTTTATCGGTTAAATGTTGGTGGGAATGATATCTCGCCGTCCCATGATACCGGTCTGTTTAGGTCATGGTCTGATGATACCCCATACCTGTATGGGGCTGCATTTGGAGTTACAGAGCCTGCTGATCCAGAGGTGAAAATTGAATATCCTCCAGACACACCTTCTTATATTGCTCCAGTTGATGTCTACAGTACTTCAAGATCAATGGGTCCAAATGCCAATATTAACGTAAATTACAATTTGACTTGGATTTTCTCAATCGATTCGGCGTTTTCTTACTTGGTGAGACTCCATTTCTGTGAGGGCACTACAAACATAACCAAGATTAATCAAAGAGTGTTTAATATTTACCTTAATAATCAAACTGCTCAGGATCAGGCTGATGTTATTGCCTGGGCAATGGACTATGGTCTCTCACATTTAAATGGGGTTCCAGTGCATAAGGATTTTGTTGTATTCGTTCCTAGTGGCCAACCTCAGCAAGATCTGTGGCTTGCACTGCATCCGGATACTGCTTCAAAGCCTGAGATTTATGATGCAATATTGAACGGAGTGGAGATATTCAAAATTAATGATACTACAGGTAATCTAGCAGGGGCAAATCCTATTCCTGCTCCTAAGCAAGATAACATTAACCCAGCATTGGCCAGACCCTCTAGTCATGGTAAATCAAAGAACCAAACGGGAATAATTGTTGGAGGTGTTTGCGGTGGAGTTGTTTTAGTACTTGTCGTTGCATTCTTAGCTTTTGGTGCATGCCGTCGTAGGCATGGAAAGAGTACCGGTGCGAGTGAAGGGCCATCCGGCTGGCTCCCTCTTTCTCTCTATGGTAATTCACACTCTGCCGGTTCTGCCAAGACCAACACAACAGGAAGTTATACATCTTCTCTCCCATCAAACCTTTGTCGCCATTTCTCATTTGCTGAAATCACGGCTGCCACAAACAACTTTGATGAGGCTTTGCTCCTTGGTGTGGGAGGATTCGGTAAGGTTTACAAAGGAGAGATTGATGGTGGAACAACCAAAGTAGCAATAAAACGTGGGAACCCACTCTCTGAGCAGGGGGTACATGAGTTCCAAACTGAGATTGAAATGCTCTCTAAACTTCGTCATCGCCACCTTGTTTCACTGATTGGCTACTGTGAAGAAAACACTGAAATGATCCTTGTGTATGATTATATGGCTCATGGAACACTCCGAGAGCATCTATACAAGACCCAGAAACCTCCACTGCCATGGAAGCAAAGGCTTGAGATATGCATCGGATCTGCTCGAGGTTTACATTATCTACATACTGGTGCCAAGCACACAATCATCCACCGTGATGTGAAAACAACTAACATTTTACTGGACGAGAAGTGGGTGGCAAAGGTCTCTGATTTTGGATTGTCAAAAACTGGCCCTACCTTGGACAACACGCATGTGAGTACTGTAGTTAAGGGTAGTTTTGGGTACTTGGATCCAGAATATTTCAGGAGGCAGCAACTGACTGATAAATCTGATGTGTACTCATTTGGCGTGGTTCTTTTTGAGATTTTGTGTGCTCGCCCAGCTTTGAACCCAACCCTTTCCAAGGAGCAAGTGAGCTTAGCGGAGTGGGCTTCTCATTGCCACAAGAAAGGCATTCTTGACCAAATCAGCGATCCTTATCTCAAGGGCAAGATAGCACCAGAATGCTTTAAGAAGTTTGCAGAGACTGCCATGAAATGTGTGGCTGACCAGGGTATTGACAGGCCATCAATGGGTGATGTCTTGTGGAACCTTGAGTTTGCTTTGCAGCTGCAAGAGAGTGCAGAGGAGAATGGTAAGGACATTGGTGGAATGCAAAGTGAAGAGGAGCCACTTTTTGCAGATTCTAAAGGTAAGAAGGACCTTGATGCGTCACCAGGTTTTGATGGTAATGTCACCGACTCCAGGAGCAGTGGCATGAGTATGAGCATCGGCGGTCGAAGCCTGGCCAGTGAAGACTCTGATGGATTAACGCCTAGTGCTGTGTTCTCCCAGATCATGAATCCAAAAGGGCGTTAA 2685 0.4492 MRNIGRWCVPFFLCLLIAIQLVGAADFVPTDKILLSCGGPPDSTDDDGRKWTTDTGSKFTSSAGKSIASSAATQDPAVPDVPYMTGRVFPSEFTYSFPVAPGRKFLRLYFYPASYSGLNASNALFSVAAQSYTLLRNFSVAQTTAALNYAFIVKEYLINVDDKTLNVTFTPSTKASNAYAFVNGIEIVSMPDIYSSTDGTMIVGEGTPFPIDNSTALENVYRLNVGGNDISPSHDTGLFRSWSDDTPYLYGAAFGVTEPADPEVKIEYPPDTPSYIAPVDVYSTSRSMGPNANINVNYNLTWIFSIDSAFSYLVRLHFCEGTTNITKINQRVFNIYLNNQTAQDQADVIAWAMDYGLSHLNGVPVHKDFVVFVPSGQPQQDLWLALHPDTASKPEIYDAILNGVEIFKINDTTGNLAGANPIPAPKQDNINPALARPSSHGKSKNQTGIIVGGVCGGVVLVLVVAFLAFGACRRRHGKSTGASEGPSGWLPLSLYGNSHSAGSAKTNTTGSYTSSLPSNLCRHFSFAEITAATNNFDEALLLGVGGFGKVYKGEIDGGTTKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEENTEMILVYDYMAHGTLREHLYKTQKPPLPWKQRLEICIGSARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVAKVSDFGLSKTGPTLDNTHVSTVVKGSFGYLDPEYFRRQQLTDKSDVYSFGVVLFEILCARPALNPTLSKEQVSLAEWASHCHKKGILDQISDPYLKGKIAPECFKKFAETAMKCVADQGIDRPSMGDVLWNLEFALQLQESAEENGKDIGGMQSEEEPLFADSKGKKDLDASPGFDGNVTDSRSSGMSMSIGGRSLASEDSDGLTPSAVFSQIMNPKGR 894
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2199 894 MobiDBLite consensus disorder prediction 852 887 - -
Glsi07g2199 894 ProSiteProfiles Protein kinase domain profile. 536 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g2199 894 PANTHER OS03G0124300 PROTEIN-RELATED 11 478 IPR046957 GO:0004672
Glsi07g2199 894 Gene3D - 33 190 - -
Glsi07g2199 894 Gene3D - 216 410 - -
Glsi07g2199 894 Gene3D Phosphorylase Kinase; domain 1 497 612 - -
Glsi07g2199 894 ProSitePatterns Protein kinases ATP-binding region signature. 542 565 IPR017441 GO:0005524
Glsi07g2199 894 Pfam Malectin-like domain 35 409 IPR024788 -
Glsi07g2199 894 CDD STKc_IRAK 542 808 - -
Glsi07g2199 894 SUPERFAMILY Protein kinase-like (PK-like) 509 809 IPR011009 -
Glsi07g2199 894 FunFam Receptor-like protein kinase FERONIA 613 823 - -
Glsi07g2199 894 FunFam FERONIA receptor-like kinase 215 410 - -
Glsi07g2199 894 Gene3D Transferase(Phosphotransferase) domain 1 613 830 - -
Glsi07g2199 894 Pfam Protein tyrosine and serine/threonine kinase 542 804 IPR001245 GO:0004672|GO:0006468
Glsi07g2199 894 FunFam FERONIA receptor-like kinase 32 191 - -
Glsi07g2199 894 SMART serkin_6 536 810 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g2199 894 FunFam Receptor-like protein kinase FERONIA 508 612 - -
Glsi07g2199 894 MobiDBLite consensus disorder prediction 835 894 - -
Glsi07g2199 894 ProSitePatterns Serine/Threonine protein kinases active-site signature. 657 669 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2199 Glsi-ChrGlsi07 67200221 67202905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2199 18 894 Receptor kinase-like Gene Family AT3G51550 74.519 0.0 1323
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Glsi07g2199 Malectin_like 4.6e-40 CL0202