Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2195 ATGGAGAATCTGCGTTTGGATCGTAAAAGGGCGATCGAAGAACTGGAGAGAGGGAAAGACTTTGCGAGCCAGCTTCGACGAGTGCTTCAGAAACCCAATGGAGAAGATGATTATGATGATGATGCCTCGACAACGACGGCGCCGTTTGCTGAAGATCTTGCTGAGAAGGTGCAAAGATCATTTTCAAACGCCCTTTTGATTCTGAATCTTCGAGGTCGTGATTCCGACGACGTCTCCCAAACGCAACTCGTCGATTCTTGCTGTGTGGTTCCCGCCAAATCTGACGAATCTGAAGATAGCTGCAGGAGTTCCGCCATGAAGAATCGAAGAGGTTCTTACAAGAGAAGGAAAACAACACAAACATGGGAGAACGAGTCTGAAACTCCATTAGAAGATTCCTATGCATGGAGAAAGTATGGCCAAAAGATGATCCTCAACGCCAAATACCCAAGGAACTACTTTAGGTGTACTCACAAGTTTGATCAGGGATGCCAAGCAATCAAACAGGGTGTGGACCTCCCGAGTTTTAAAGGGTGGGCCATGCAACTCAAAAGGCGATGGCGATTGCTTGTCTATATCATTGGAGTAAGCAAAATATCACAAACCCCTAAATCACTAGCAGCATCGTTCTGTCATCCCAGCGATCACGCTCTAGCAAGTTTTGGAGATGTGACTTGTAGAAAATAG 687 0.4614 MENLRLDRKRAIEELERGKDFASQLRRVLQKPNGEDDYDDDASTTTAPFAEDLAEKVQRSFSNALLILNLRGRDSDDVSQTQLVDSCCVVPAKSDESEDSCRSSAMKNRRGSYKRRKTTQTWENESETPLEDSYAWRKYGQKMILNAKYPRNYFRCTHKFDQGCQAIKQGVDLPSFKGWAMQLKRRWRLLVYIIGVSKISQTPKSLAASFCHPSDHALASFGDVTCRK 228
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2195 228 Gene3D WRKY domain 112 174 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi07g2195 228 ProSiteProfiles WRKY domain profile. 125 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi07g2195 228 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 7 169 IPR044810 GO:0003700
Glsi07g2195 228 SUPERFAMILY WRKY DNA-binding domain 127 169 IPR036576 GO:0003700|GO:0006355|GO:0043565
Glsi07g2195 228 Pfam WRKY DNA -binding domain 131 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Glsi07g2195 228 SMART WRKY_cls 130 179 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2195 Glsi-ChrGlsi07 67173121 67175349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2195 1 169 WRKY Transcription Factor Family AT3G56400 37.572 3.43e-28 106
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Glsi07g2195 WRKY 1.2e-14 CL0274