Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2186 ATGAGTTGCCTTCTTGCAGAAATCTACAGTTCTATACAACAGTCAAGTTGTGTTGACAGGATGGGGTGTTTCACTGTCTTGAAGAGTAAGAAGAAAAAGTCCGAACAGATCCCGCATGTAAAACGTGCCAACCACAAAGATCATTTACCTACTGTACTGCCTGAACCTCAAACTCATACGCGCTCACTGCAGTCTGCACCACCTAGTTTTAGGACCAGAGTGAAACCCCTTCAAACCATTAATAAGGTCGCCAACAATAGAATACGAGCATTATCTGCTCCATCAACTCTTGATGCAGCTGATCAAGATGCTTTGGTGTCTGTTGAGTATGAGGAACAAGAAGAGTTAAAACACCGTGCTGGATCAATAAAGGAGCAGTGGTTATCCAGTCCACAACCTTTACCTCTCCCATCTCCTCAGGGTGGTGGTGCACTAAAGGCTACCCTTAGCTTTAAGTCAGGGACAGCTAGTGGTCCTGTACAACATTCTGGCCCTTTGCCATTGCCACCTACAGTTTCACTTAGAAACTTTATGTATGAGGAAATTGCTGCTGCTTGCCATCATTTCTCTTCAGATCGATGCATGTCGGAAGGTCTTTCTTCCACCGTATTTAAAGCTTATTTTGGTGATGATGCTTCAAGTTCAAAAAAGTTCGAAGCCACTGTCACTCGCCTTCACCCATCAACTCAGGGCTTGAAGGAATTCATAAATGAGGTTAATACCCTGGCATCTTTGCAACACCCAAACCTTTGTAAATTGCTTGGTTTTCATGCTCGTGAGGGTTCAGAGCAGAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCGCCTGTTGTATGGTAGATCTGATGGCCCGCCTATTGATTGGAATACAAGAATGAAAATTGCATTATGCGCTGCACAAGGTCTTACTTTCCTGCATGAAGAAGGGCCTTTCCAGGCAATGTATAATGAATTTTCAACCGCCAACATACAGATTGACAAAGATTTTAGTGCAAAGCTTTCAGGTTATGGTTGTGTTGGACATATTCCTGAGGAAGAGATTTCAAGCAATTCATCGGCCATGGGAAACCTATCAGTTGAGACACTGGAAAGAGGAATGCTCACTCCCAAGAGCAATGTTTGGAGTTTTGGAATTTTTCTTCTCGAGCTACTTACTGGAAGAAAGAATTTTGACAGTCGTCACCCCAACGAAGAGAGGAATTTAGTCAAGTGGAGTCGGCCTTTCCTAGCCGATGATTGTCGACTGTCACTTATCATGGATCCTCAACTTAAAGGCCGCTTTTCTTCCAAAGCAGCAAGGACAGTATCTGACATTGCACAAAGATGCCTTCAAAAGGAACCATCAGAAAGACCCACCATGAGAACTGTTGTTGAGCATCTCAAAAAAATACAGGATGTGAAGTACTCTTGTCGATTCCCGCTGCAAGAGCCGGCAGCAGTTCCCGGAAAACAGATGTCAAGATCACCAAGCCTCAATGGTATCATCTGTCCTGCACCTAGGTTGAGTTTCTCACCATCACCACCATCAGGAGCCCGACCATCTGTCTCCCCTCCAAGATGGTCTGGCGTGCCACTCTTGCTTCCTCCCCGTGCTTGTTCTTCCCCTCTCTCGTTGGAGGAGCTTGATCGGCGGAAGTCATCATCATCAACCTCTAGGAGGGCTAGTGTTGAAGGATATTGA 1692 0.4515 MSCLLAEIYSSIQQSSCVDRMGCFTVLKSKKKKSEQIPHVKRANHKDHLPTVLPEPQTHTRSLQSAPPSFRTRVKPLQTINKVANNRIRALSAPSTLDAADQDALVSVEYEEQEELKHRAGSIKEQWLSSPQPLPLPSPQGGGALKATLSFKSGTASGPVQHSGPLPLPPTVSLRNFMYEEIAAACHHFSSDRCMSEGLSSTVFKAYFGDDASSSKKFEATVTRLHPSTQGLKEFINEVNTLASLQHPNLCKLLGFHAREGSEQRMLVYERLYHGSLDRLLYGRSDGPPIDWNTRMKIALCAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSNSSAMGNLSVETLERGMLTPKSNVWSFGIFLLELLTGRKNFDSRHPNEERNLVKWSRPFLADDCRLSLIMDPQLKGRFSSKAARTVSDIAQRCLQKEPSERPTMRTVVEHLKKIQDVKYSCRFPLQEPAAVPGKQMSRSPSLNGIICPAPRLSFSPSPPSGARPSVSPPRWSGVPLLLPPRACSSPLSLEELDRRKSSSSTSRRASVEGY 563
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2186 563 PANTHER OS01G0588500 PROTEIN-RELATED 114 468 - -
Glsi07g2186 563 MobiDBLite consensus disorder prediction 46 68 - -
Glsi07g2186 563 ProSiteProfiles Protein kinase domain profile. 189 466 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g2186 563 Gene3D Phosphorylase Kinase; domain 1 169 270 - -
Glsi07g2186 563 Pfam Protein tyrosine and serine/threonine kinase 193 464 IPR001245 GO:0004672|GO:0006468
Glsi07g2186 563 Gene3D Transferase(Phosphotransferase) domain 1 272 476 - -
Glsi07g2186 563 MobiDBLite consensus disorder prediction 540 563 - -
Glsi07g2186 563 SUPERFAMILY Protein kinase-like (PK-like) 165 475 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2186 Glsi-ChrGlsi07 67110385 67114259 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2186 168 470 Receptor kinase-like Gene Family AT4G02010 37.987 6.31e-57 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Glsi07g2186 PK_Tyr_Ser-Thr 1.4e-25 CL0016