Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2179 ATGAGTTACAGCGACAAGAACAGAGGAGGAGAAGAGAGGGAATATGAAGAATCGGACTTACGGAGTTCTGGGGAATTAGAATCGAAATCAGGGAAGCAGAATGGATCTATCACAACCCAGCAGCTAACAATCGATGAGAATCTCTTGGTTGACCCCAAACAACTGTTTATTGGGTCAAAAATCGGAGAGGGAGCTCATGGCAAAGTTTATGAAGGAAGGTACGGAGATCAAATTGTTGCAATTAAAGTTCTACACCGTGGGAGCACTTCAGAAGAAAGAGCATCCCTTGAGGATCGTTTCGCTAGGGAAGTCAATATGATGTCGCGTGTCCATCATGAGAATCTAGTTCAGTTTATTGGAGCTTGTAAGGATCCTTTGATGGTTATTGTCACGGAGCTGTTACCAGGGATGTCGCTGCGGAAATATATGACCAGTATACGTCCCGGGCTATTAGACTGTCATGTGGCTATAAACTTTGCTCTCGATGTTGCTCGTGCCATGGATTGCCTACACGCCAATGGGATCATACATAGAGATCTGAAACCTGACAATCTATTGCTTACGGCGAATCAGAAGTCTGTAAAACTTGCAGATTTTGGTCTTGCAAGAGAAGAATCTGTGACTGAAATGATGACTGCAGAAACAGGAACTTATCGTTGGATGGCACCAGAGCTGTACAGTACAGTGACATTGCGTCAAGGGGAGAAAAAGCACTACAACAACAAGGTTGATGTCTACAGCTTCGGAATTGTTTTGTGGGAGCTTCTAACAAACCGCATGCCTTTTGAAGGGATGTCTAATTTACAGGCTGCTTATGCTGCTGCATTTAAGCATCAGAGGCCAAGCCTCCCGGAAGATATGTCCCCAGATCTTGCCTTTATCATACAATCATGTTGGGTTGAAGATCCGAATTTGAGACCGAGCTTTAGTCAGATCATCCGCATGCTCAATGCATTTCTCTTCACGCTGTCACCTGCACCGTCTGGCCCTTTGCCAGAACCTGACAACAACGAAGCTGAGGTAGCAACTACAAGTAATGGTACCATAACTGAGTTTTCTACTCGAAACCGAGGAAAGTTTGCTTTTCTTCGGCAGTTGTTTACTTCCAAGAGGACCAAAAACTAA 1125 0.4453 MSYSDKNRGGEEREYEESDLRSSGELESKSGKQNGSITTQQLTIDENLLVDPKQLFIGSKIGEGAHGKVYEGRYGDQIVAIKVLHRGSTSEERASLEDRFAREVNMMSRVHHENLVQFIGACKDPLMVIVTELLPGMSLRKYMTSIRPGLLDCHVAINFALDVARAMDCLHANGIIHRDLKPDNLLLTANQKSVKLADFGLAREESVTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNNKVDVYSFGIVLWELLTNRMPFEGMSNLQAAYAAAFKHQRPSLPEDMSPDLAFIIQSCWVEDPNLRPSFSQIIRMLNAFLFTLSPAPSGPLPEPDNNEAEVATTSNGTITEFSTRNRGKFAFLRQLFTSKRTKN 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2179 374 Gene3D Transferase(Phosphotransferase) domain 1 138 329 - -
Glsi07g2179 374 PRINTS Tyrosine kinase catalytic domain signature 131 144 IPR001245 GO:0004672|GO:0006468
Glsi07g2179 374 PRINTS Tyrosine kinase catalytic domain signature 287 309 IPR001245 GO:0004672|GO:0006468
Glsi07g2179 374 PRINTS Tyrosine kinase catalytic domain signature 169 187 IPR001245 GO:0004672|GO:0006468
Glsi07g2179 374 PRINTS Tyrosine kinase catalytic domain signature 243 265 IPR001245 GO:0004672|GO:0006468
Glsi07g2179 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 175 187 IPR008271 GO:0004672|GO:0006468
Glsi07g2179 374 Pfam Protein tyrosine and serine/threonine kinase 57 316 IPR001245 GO:0004672|GO:0006468
Glsi07g2179 374 MobiDBLite consensus disorder prediction 1 38 - -
Glsi07g2179 374 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 51 318 - -
Glsi07g2179 374 CDD STKc_MAP3K-like 61 316 - -
Glsi07g2179 374 SMART serkin_6 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g2179 374 Gene3D Phosphorylase Kinase; domain 1 43 134 - -
Glsi07g2179 374 MobiDBLite consensus disorder prediction 1 26 - -
Glsi07g2179 374 ProSiteProfiles Protein kinase domain profile. 55 320 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g2179 374 SUPERFAMILY Protein kinase-like (PK-like) 47 337 IPR011009 -
Glsi07g2179 374 FunFam Kinase suppressor of Ras 1 44 134 - -
Glsi07g2179 374 ProSitePatterns Protein kinases ATP-binding region signature. 61 82 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2179 Glsi-ChrGlsi07 67067664 67071536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2179 43 374 MAP Kinase Kinase Kinase AT5G01850 74.438 0.0 521
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Glsi07g2179 PK_Tyr_Ser-Thr 3.5e-59 CL0016