Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2175 ATGGGTAATTACAGGTTCAAGTTCTCGGATATGATGCCCAATGCCTGGTTTTACAAGCTAAGAGACATGGGAAACAGAAGGAAAAATCAAATCACCAATCTCTCCAACAAGAAAAAACCACAATCTTCATCACCCTCAACCTCAAAATCATCAAAGCCGAAGCAAACCCACCATTGCAGTCCCAGAAAATCTTACTACTTTACAAGGGAGCTTCACCCAAATAAACCACAAGTCTCGGAAACCAACCCCAGAAAATTATCCTCTGTTTCTTCTGATAGCTCTGCTGATTCAGAATCACCTAAGCCTGAGTTCAGAACAGACCGTATTCTTCCGACAGAATCATTTGACGAAATGGTTTCGTGGTCCAACTCCGATGATATCGTTCTCCATGTGGAAAAGAGTTGTATATCCAGAAAAGATGAAAAGCTGAAAGGGTTTGATTCATTTTCAGAGTTTGAGCTTCCCTTGATCACAACCAAGCCTGATAAATTCAATGACGCGAAGAAAGAAACCAAACGCAGAAGCAGAATGGGTAGATATGAAGAACCCAATGTACAGAAATCTCTGAAAGTGAAGATTTTGAAGGAAGATAGAGCATCAATCAGAGAACAGAGGACTACCCCAGTTAGGAGATTCAAGCTTCGGATGAATTCTCCGAGACTCGGAAGCCAGAAGATTCCGACACATGGCAGGAAAAGCGTGTCGTCGGCTGAGAGGACGAGGACGAGGACGAGGACGAGGAGGAGAAGGGTTTCAGAAAGCTTGGCGATTGTGAAGGCATCGATGGATCCAAAGAGAGATTTCAGAGAGTCAATGGTGGAGATGATTGTGGAGAACAACATAAGGGGACCAAAGGATTTGGAAGATCTTCTTGCTTGCTATCTTTGTTTGAATTCAGCCGAGTATCATGAACTCATTATTGAAGTTTTCAAGCAAATATGGTTTGATTTGACAGACTCCCAGTATGTAATATTGTGA 978 0.4243 MGNYRFKFSDMMPNAWFYKLRDMGNRRKNQITNLSNKKKPQSSSPSTSKSSKPKQTHHCSPRKSYYFTRELHPNKPQVSETNPRKLSSVSSDSSADSESPKPEFRTDRILPTESFDEMVSWSNSDDIVLHVEKSCISRKDEKLKGFDSFSEFELPLITTKPDKFNDAKKETKRRSRMGRYEEPNVQKSLKVKILKEDRASIREQRTTPVRRFKLRMNSPRLGSQKIPTHGRKSVSSAERTRTRTRTRRRRVSESLAIVKASMDPKRDFRESMVEMIVENNIRGPKDLEDLLACYLCLNSAEYHELIIEVFKQIWFDLTDSQYVIL 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2175 325 Pfam Transcriptional repressor, ovate 261 317 IPR006458 -
Glsi07g2175 325 ProSiteProfiles OVATE domain profile. 257 316 IPR006458 -
Glsi07g2175 325 MobiDBLite consensus disorder prediction 32 109 - -
Glsi07g2175 325 MobiDBLite consensus disorder prediction 74 97 - -
Glsi07g2175 325 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 54 319 IPR038933 GO:0045892
Glsi07g2175 325 MobiDBLite consensus disorder prediction 32 54 - -
Glsi07g2175 325 MobiDBLite consensus disorder prediction 220 250 - -
Glsi07g2175 325 NCBIfam uncharacterized plant-specific domain TIGR01568 256 318 IPR006458 -
Glsi07g2175 325 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2175 Glsi-ChrGlsi07 67019662 67020639 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Glsi07g2175 Ovate 2.1e-24 No_clan