Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2171 ATGGAAGCTGACTCTGTATATAAATCTACTAAGGTCCGAACCGTGAGTCCGGTGACTGAACCGGGTTCTGACGGCGGAGTCGTGAAAAAGGAGATAAATTTGAGAGTGGAGATTGATACCTCGGCTCCGTTTGCGTCTGTTAAAGAGGCTGTGACCAGATTCGGGGGTGTTGGTTTCTGGAAACCCACCCATAATAACCTGTCGGGTACCCAGCAGGACACGGAAGAACTTGACCCTGGAAAACTAGAGGAGCAGGCAAAAGTATTGGAAAAAGAATTGATCCTGAAAGAAAGGGAAACTCTGGATGTCTTAAAAGAATTGGAAAGTACTAAAAGGCTGGTGGAAGATTTAAAGTCAAAGCTACAGAAGGAAGAATCTGAAGCTAATTTGACTCTTGAGGCTGAAAAGGAGAACCAAGTGAATCATTTGGATGTTCTTGACAATTCAAAGCAGGGTTTTAGCCCCTGTCCTTCATCTTCTCCAGGTCTGATATTAATGGAATTGAAGCAAGCTAAATTGAATCTAACCAGAACCACCAATGATCTTGCTGATGTAAGAGCTTCTGTTGTATCACTTAGTAAGAAGTTAGAGAAGGAAAGAACCTCACTTGAGGAAACTCGCGAGAGGTTAACTCACAATTCTTCGAAGTTATCTTCTCTTGAGGAAGAACTAAACAAGACAAGGCTAAGGCTGCAAGTGGCAAAAGATGCTGAAATTAAAGGTGGTTTGGATGATCCTTCAGATATTACCAAAGAGCTCCAAAGATTGAGTTCTGAGGCAGAGCATTTCAGAAGAACGGGAGAAGCTGCGAAATCAGAAGTGTTAAGAACAATGTCTAAGATTGAACAGACAAAAACTATGATAAGAACCGCAGAAATCAGGTTGGTTGCTGCTAGAATGGTGAAAAAAGCTTCCAGAGCTGCAGAAGCAGCTGCCCTTGCAGAAATTAATGTTTTGAGTTCATCTGGAGATTGTATGGGAAACCATGATGAAGTAACTCTTTCATTTGAAGAGTATACTGCTCTAACTCGCAAAGCTCGAGATGCAGAGGAACACTCTCAGAAAAGAGTTATGGAGGCCATGGTTCAAGTTGATCAAGCAAAGTTGTCAAGAATGGACATTCTGAAAAGGGTAGAGGAAGCTACAAAGGAAGTTAAAACCAGCAAGAAAGCCCTGGAAGAAGCTCTTGAAAGGGTAGAGGCTGCAAATAGAGGGAAGCTAGTAGTTGAAGAGGCTTTAAGGACATGGCGATGTGAGGGTCATCACAAAAGACGCCCTTCTGTACATAACTCTACCAAGTTTAAAAACTCTTACCCATCTCACCATCGTAGAGGTTCTCGGTCACTCGATGTAAATGAACTGAATCTGGTAAATGATGAAGCCATGACAGAACCAAAACCAGTCCTATCAATAGGACAAATCCTTAGCAGGAAGCTGCTTCTACCAGGAGAGTTTGAAGCAGGACTGGTTGGAGAAAGAATGTTAGCAAAACCGACGGTGTCATTGGGTCAGATGCTTGGCAAGCAAAAGGATGGTCCATCCTTTAGAAGGAAAGTTGAGAATGAAAATGGGCAGAAGCAGTTTTCTGGGAAGAGAAAGAAATTTGGGTTTGCTCGATTATCACTTCTTTTGGCAAAACAACAAAAGAAGAAGCCAACGCTGAATTTGAGTGTGCTAGTTATTTGAGATTTCAAATCCTTCCTAAAAAGTTTTTTAGTGCTTTTTGCGAGCAACATGGAGAAGAGAACAGGGATCTTATTTCTTGTTGTGTTGGGTGCTGCTTGGGCTTGTGATGCAAGGGAACTGGCAAACCCTGATCTTTGGAAGGATATTACAGCAAATTCTGACACTTCTGAACCAAACAGAAAACAAGATGTGTGTGCACTTTGTGAGGAATATACTGCTAAAGCACTGGATTACCTAAATAACAACAAGACCCAGGATGCGATCATTGATACCCTTCACAATAGTTGCCACCAGCTGCGCTCTTTTGAGCAGCAGTGCACAACTTTGGTGGACAATTATGCTTCCCTTTTCTTCTCAGAAATAGCTTCAATACAGCCTGGAGAACTCTGCAAAAAGGTCAATCTCTGTCACCAAATTGCTAAGATTTCCTCAAAAGTCCAAGAAGATAGCTGTGGGTTATGCAAAGATGCTGTTTCTTCATTATTGGTTAAGTTGAAAGATCCTGACACCAAGATGGAGATAATTGAGTCACTATTAAAGGTATGCAATTCCACGGAGAAGTATGCGAAGAAGTGCAAGAGGCTGGTTTTCCAATATGGACCTGTGATCCTTGTCAATGCAGAGAAGTTCCTGGAAACAAAAGATGTGTGCACTGTATTACATGCCTGCAAAAATACCAAGGTAGATAGCCACAAAGCCTGGGTCATGAAAGAGATACCCTTGGTTTCTGACTTCTAA 2424 0.4204 MEADSVYKSTKVRTVSPVTEPGSDGGVVKKEINLRVEIDTSAPFASVKEAVTRFGGVGFWKPTHNNLSGTQQDTEELDPGKLEEQAKVLEKELILKERETLDVLKELESTKRLVEDLKSKLQKEESEANLTLEAEKENQVNHLDVLDNSKQGFSPCPSSSPGLILMELKQAKLNLTRTTNDLADVRASVVSLSKKLEKERTSLEETRERLTHNSSKLSSLEEELNKTRLRLQVAKDAEIKGGLDDPSDITKELQRLSSEAEHFRRTGEAAKSEVLRTMSKIEQTKTMIRTAEIRLVAARMVKKASRAAEAAALAEINVLSSSGDCMGNHDEVTLSFEEYTALTRKARDAEEHSQKRVMEAMVQVDQAKLSRMDILKRVEEATKEVKTSKKALEEALERVEAANRGKLVVEEALRTWRCEGHHKRRPSVHNSTKFKNSYPSHHRRGSRSLDVNELNLVNDEAMTEPKPVLSIGQILSRKLLLPGEFEAGLVGERMLAKPTVSLGQMLGKQKDGPSFRRKVENENGQKQFSGKRKKFGFARLSLLLAKQQKKKPTLNLSVLVIXDFKSFLKSFLVLFASNMEKRTGILFLVVLGAAWACDARELANPDLWKDITANSDTSEPNRKQDVCALCEEYTAKALDYLNNNKTQDAIIDTLHNSCHQLRSFEQQCTTLVDNYASLFFSEIASIQPGELCKKVNLCHQIAKISSKVQEDSCGLCKDAVSSLLVKLKDPDTKMEIIESLLKVCNSTEKYAKKCKRLVFQYGPVILVNAEKFLETKDVCTVLHACKNTKVDSHKAWVMKEIPLVSDF 807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2171 807 ProSiteProfiles Saposin B type domain profile. 623 702 IPR008139 -
Glsi07g2171 807 Pfam Saposin-like type B, region 2 666 698 IPR008138 -
Glsi07g2171 807 Pfam Saposin-like type B, region 2 752 785 IPR008138 -
Glsi07g2171 807 Coils Coil 104 138 - -
Glsi07g2171 807 MobiDBLite consensus disorder prediction 423 442 - -
Glsi07g2171 807 Gene3D - 708 788 - -
Glsi07g2171 807 SMART sapb_4 625 698 IPR008139 -
Glsi07g2171 807 SMART sapb_4 711 785 IPR008139 -
Glsi07g2171 807 ProSiteProfiles Saposin B type domain profile. 709 789 IPR008139 -
Glsi07g2171 807 SUPERFAMILY Saposin 625 698 IPR011001 -
Glsi07g2171 807 FunFam Pulmonary surfactant-associated protein B 709 787 - -
Glsi07g2171 807 SUPERFAMILY Saposin 711 788 IPR011001 -
Glsi07g2171 807 MobiDBLite consensus disorder prediction 1 26 - -
Glsi07g2171 807 Pfam Weak chloroplast movement under blue light 166 421 IPR008545 -
Glsi07g2171 807 Pfam Weak chloroplast movement under blue light 36 129 IPR008545 -
Glsi07g2171 807 Coils Coil 168 237 - -
Glsi07g2171 807 Coils Coil 375 402 - -
Glsi07g2171 807 Pfam Saposin-like type B, region 1 711 746 IPR007856 GO:0006629
Glsi07g2171 807 Pfam Saposin-like type B, region 1 625 661 IPR007856 GO:0006629
Glsi07g2171 807 PANTHER HEAVY CHAIN, PUTATIVE, EXPRESSED-RELATED-RELATED 36 129 - -
Glsi07g2171 807 MobiDBLite consensus disorder prediction 423 445 - -
Glsi07g2171 807 Gene3D - 622 699 - -
Glsi07g2171 807 Gene3D - 164 322 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2171 Glsi-ChrGlsi07 66984477 66993453 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi07g2171 07 66984477 66993453 Glsi06g1257 06 22416078 22417812 CCT
Glsi07g2171 07 66984477 66993453 Glsi07g2171 07 66984477 66993453 ECH