Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2169 ATGGCGTCACATGGGTATTTCTACGTTATCCTTCAGGCTCTGGTTTTCGCAGCTCTTGCAACCACAGCTTTCTCAGCAACAGAACTGTCTCCTAATTTCTATGACAAATCGTGCCCTAACGCTTTGACGACCATCAAAAGAGTTGTCCAGGCTGCGGTTAAGAAAGAGCGTCGCATGGGTGCTTCTTTGCTACGCATGCACTTCCATGATTGCTTTGTTAAAGGTTGTGATGGTTCGATTCTTCTGGATCCCTCACCCACCATTGACAGTGAAAAGAACGCAATTCCAAATTTAAATTCTATTCGAGGATTTGAAGTGATCGATAAGATAAAGAAGGAAGTGGACAAAGCATGCGGACGCCCAGTTGTCTCTTGCGCAGACATAGTGGCTGTTGCTGCTAGAGACTCTGTCGTTGCGTTAGGGGGGCCAACATGGAAAGTGAGATTGGGGAGAAGAGACTCCACCACAGCAAGCCGCGCCACCGCTGACTCAGACATCCCACCGCCAACTTTGGACCTTTCACAACTCATTAGCAACTTCAAGAATCAAGGCCTCAATGAGAAAGACCTAGTTGTGCTCTCTGGAGGTCACACCATCGGATTCTCACGCTGTGTTTCATTTAGGGACCATATCTACAATGATTCCAACATCAACCCCTCTTTTGCAAAAGCCCTTAGGAAGGGGTGCCCTAGAATTGGAGGTGACAATAACCTTGCTCCATTAGACCCTACTGATGCTAGCTTTGACGTTGCCTACTTCACCAATTTGGTTCAGAAGAAAGGTGTTCTTCACTCTGATCAAGAACTGTTCAATGGTGGTTCCACTGATAATTTTATTAGAAAGTACAGCTACGATACTAAGGCTTTCTATAAGGATTTTGGAAATTCTATGATTAAGATGGGAAATATAAAGCCACTCACTGGGAAGCGAGGTCAAATTCGTGTGAATTGCAGGAAAGTTAACTAA 966 0.4503 MASHGYFYVILQALVFAALATTAFSATELSPNFYDKSCPNALTTIKRVVQAAVKKERRMGASLLRMHFHDCFVKGCDGSILLDPSPTIDSEKNAIPNLNSIRGFEVIDKIKKEVDKACGRPVVSCADIVAVAARDSVVALGGPTWKVRLGRRDSTTASRATADSDIPPPTLDLSQLISNFKNQGLNEKDLVVLSGGHTIGFSRCVSFRDHIYNDSNINPSFAKALRKGCPRIGGDNNLAPLDPTDASFDVAYFTNLVQKKGVLHSDQELFNGGSTDNFIRKYSYDTKAFYKDFGNSMIKMGNIKPLTGKRGQIRVNCRKVN 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2169 321 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Glsi07g2169 321 ProSiteProfiles Plant heme peroxidase family profile. 28 321 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 Gene3D - 32 321 - -
Glsi07g2169 321 CDD secretory_peroxidase 28 320 IPR033905 GO:0004601|GO:0042744
Glsi07g2169 321 Pfam Peroxidase 46 283 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 FunFam Peroxidase 32 176 - -
Glsi07g2169 321 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Glsi07g2169 321 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 PRINTS Plant peroxidase signature 295 308 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 PRINTS Plant peroxidase signature 255 272 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 SUPERFAMILY Heme-dependent peroxidases 28 321 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 PRINTS Haem peroxidase superfamily signature 241 256 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 Gene3D Peroxidase, domain 2 167 300 - -
Glsi07g2169 321 PANTHER PEROXIDASE 72-RELATED 26 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2169 321 FunFam Peroxidase 167 300 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2169 Glsi-ChrGlsi07 66945710 66947870 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2169 28 321 Peroxidase AT5G05340 59.596 1.37e-126 363