Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2168 ATGGCAGCTAGTTCTTCTCCCTCAATGACCGTTATTTCCAGCTTGAAACTCAGCTTCTGCTTGTTCTTATGTCTTACTGGAATAGTTTCAGCTCAGTTATCCTCTTCATTCTACGCATTTTCTTGTCCTCTTGCCCTTCCTACCATTAAAACAGCCGTATTGGCTGCCGTGTTAAAAGAGCCTCGCATGGGAGCATCCTTGCTGCGTCTCCATTTCCATGATTGCTTTGTCCAAGGATGCGATGCATCAATATTGTTAGACGACACAACAAATTTCAATGGCGAAAAAACTGCTTTTCCCAACGTTAATTCAGTTAGGGGCTACGAGGTTATAGATCGCATAAAATCTATACTGGAGTTGTTATGTCCAGGTGTTGTCTCTTGTGCTGACATTGTAGCCGTTGCTGCAAGGGATTCTGTCTTGGTTCTGGGTGGACCATTTTGGCAAGTGAGGTTGGGCAGAAGAGACTCAACCACAGCAAGTCTAAATGATGCTAACAGAGACTTGCCTGCTCCCTTTTTAAATCTTAGTGACCTTATCAACGCTTTTTCTAAAAAAGGCTTCACAAAAGAAGAAATGGTTGCTTTGTCAGGATCTCACACAATAGGCCAAGGGAGGTGTACAACTTTCAGAACCAGGATTTACAACGACACCAACATAGATTCATCCTTTGCAACTTCACTGCAAGCAAAATGTCCCAGCACAGGTGGTGATGACAATCTATCCCCTTTAGATGCTACTACTGCAAACTTTTTTGACAACTTTTACTTCAAGAATTTGAAGAACAAAAAGGGTCTCTTCCATTCGGACCAAGAACTCTTCAATGGAGGTTCCACAGACTCTCAAGTTAATGCTTACATTAGCAATCCTTTACTTTTCTTTGAAGACTTTGCTAATGCAATGATTAAGATGGGAGAACTTAGTCCTCTAACTGGCTCCAATGGCCAGATCAGGAGAAACTGCAGGAAGGTCAATTGA 978 0.4223 MAASSSPSMTVISSLKLSFCLFLCLTGIVSAQLSSSFYAFSCPLALPTIKTAVLAAVLKEPRMGASLLRLHFHDCFVQGCDASILLDDTTNFNGEKTAFPNVNSVRGYEVIDRIKSILELLCPGVVSCADIVAVAARDSVLVLGGPFWQVRLGRRDSTTASLNDANRDLPAPFLNLSDLINAFSKKGFTKEEMVALSGSHTIGQGRCTTFRTRIYNDTNIDSSFATSLQAKCPSTGGDDNLSPLDATTANFFDNFYFKNLKNKKGLFHSDQELFNGGSTDSQVNAYISNPLLFFEDFANAMIKMGELSPLTGSNGQIRRNCRKVN 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2168 325 ProSiteProfiles Plant heme peroxidase family profile. 32 325 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 CDD secretory_peroxidase 32 324 IPR033905 GO:0004601|GO:0042744
Glsi07g2168 325 PRINTS Plant peroxidase signature 42 61 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Plant peroxidase signature 106 119 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Plant peroxidase signature 243 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Plant peroxidase signature 259 276 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Plant peroxidase signature 191 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Plant peroxidase signature 144 159 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Plant peroxidase signature 299 312 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Plant peroxidase signature 66 86 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Plant peroxidase signature 125 135 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 Gene3D - 37 322 - -
Glsi07g2168 325 Pfam Peroxidase 52 288 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 FunFam Peroxidase 170 304 - -
Glsi07g2168 325 ProSitePatterns Peroxidases active site signature. 64 75 IPR019794 GO:0004601
Glsi07g2168 325 Gene3D Peroxidase, domain 2 170 304 - -
Glsi07g2168 325 PANTHER PEROXIDASE 72-RELATED 28 324 IPR000823 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 ProSitePatterns Peroxidases proximal heme-ligand signature. 192 202 IPR019793 -
Glsi07g2168 325 SUPERFAMILY Heme-dependent peroxidases 32 325 IPR010255 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Haem peroxidase superfamily signature 126 143 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Haem peroxidase superfamily signature 64 78 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Haem peroxidase superfamily signature 192 207 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Haem peroxidase superfamily signature 144 156 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 PRINTS Haem peroxidase superfamily signature 245 260 IPR002016 GO:0004601|GO:0006979|GO:0020037
Glsi07g2168 325 FunFam Peroxidase 36 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2168 Glsi-ChrGlsi07 66926885 66929529 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2168 28 325 Peroxidase AT5G05340 62.333 3.34e-136 387