Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2137 ATGAAGGAACCCAACGATCGATTCATTTGGCCCGTCTTTTATGATGTAGATCCATCTGATATTCGACATCAAACGGGTTCCTACAAAGAAGCTTTCGATCGGTATGAAGGAGTCAAGGATGAGACGACGGTGAAGCGTTGGAGGCTTGCTTTGACTGAAGCAGCTGATATGTCTGGTTGGCCTTTTGATCCCAGGACTGCATTGGCTCACTCTCATTTACCTCACTGGGTCTGGTCGGATATGCCTTATGAGCTAGCCCTTTTTCATCCCTTCAGTTATGATCCTCGAGTAGACGCAGTATGCTCACTTCTTAACAAAGAGCCTCATTGCGATGGAGCCACAATTGTTGGAATATTTGGTGTTGGCGGAATAGGAAAATCGACAATTGCACGAGCTACCTATAATGAGATTGCAATTAATTTTAAACATAAATGCTTTCTTAATGATATTAAAGAACGTTCCATCTGTGAAGTTCAAGGGAGACTGCTTTCTGAATTACTCAAGGATATTCATTGA 516 0.4244 MKEPNDRFIWPVFYDVDPSDIRHQTGSYKEAFDRYEGVKDETTVKRWRLALTEAADMSGWPFDPRTALAHSHLPHWVWSDMPYELALFHPFSYDPRVDAVCSLLNKEPHCDGATIVGIFGVGGIGKSTIARATYNEIAINFKHKCFLNDIKERSICEVQGRLLSELLKDIH 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2137 171 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 168 IPR027417 -
Glsi07g2137 171 Gene3D - 1 73 IPR035897 -
Glsi07g2137 171 Pfam TIR domain 9 85 IPR000157 GO:0007165
Glsi07g2137 171 SUPERFAMILY Toll/Interleukin receptor TIR domain 5 60 IPR035897 -
Glsi07g2137 171 Gene3D - 77 171 IPR027417 -
Glsi07g2137 171 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 9 167 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2137 Glsi-ChrGlsi07 66202352 66203864 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2137 6 168 WRKY Transcription Factor Family AT4G12020 27.907 7.03e-10 55.5