Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2124 ATGGGAAATTGTTACAGTCACGATGATCCGTATGCAGGCAAGGTGAATAGGGAGGTGGATGATAAAGATTATAATCTCCGAGAAGAGAATGATTTTACAAATGGAGATGGCGAAGCTCGAATTAGGTTAAGAGGTTCCTCTAGGTTTGTATCAATGTACACCCAACAGGGAAGTAAAGGAATCAACCAAGATGCATTGACTGTTTGGGAGAACTTTACTGGAGATAAGGACATGGTCTTTTGTGGTGTGTTCGATGGTCATGGTCCTCTTGGGCACAAGGTTTCACAATATATACGAGACAATCTACCCTCAAAACTCTCTGCATCAATCAAAATGTCGCAACAGAAGGCCTGCAAATACTATGATACTTATTTTCCGGATAGAGACAACAATGTTTACGTGCATTGTGACAATAACAAAATCATGTCCCTAGCTTCATGGGAGGGTAGCCTTACGAAGTCTTTCAATGAGATGGATGAAGACGTTGCTCGGGACATTAACACCGACAGCTTTGTCAGTGGCGCCACCGCCGTAACTGTAATTAAACAGGGTGACCATTTGATAGTTAGCAATCTGGGGGATTCTCGTGCAGTTCTTTGCACAAGAGGAGACAAAGAGGAACTTATTCCTGTTCAACTTACAGTTGACTTGAAACCAGATATTCCAAGTGAAGCTATAAGAATCCATAATTGTGAAGGCAGAGTTGTTCCAGCATCAGAAGAGTCAGACGTGTGCAGAATATACATGCCTGATGAAAACTGCCCTGGACTAGCCATGTCACGAGCCTTCGGAGACTTTTGCCTAAAAGATTATGGCCTCATCTCAGTTCCTGACATCTTTTATAGAAAACTAACCAAGCAGGACCAATTTGTGGTTTTGGCAACTGATGGGGTTTGGGATGTGCTAACAAACATTGAAGTAGTAAGCATAGTTGCCTCAGCACCAAGTAGGTCCATGGCAGCCAAACTGTTAGTAAAGCATGCTGTTGGGGCATGGAGATTTAAGTATCCTTTTGCCAAGGTTGATGATTGTGCTGTTATATGCTTGTTCCTGGATGGACAGCCTGGGAAGAAAAGGTGTCAAAAGAAGCACCTGCGTCGTCGTCGCTCTAAATCCACTAGACATGAAGACAATGAAAGTTTAGATGGCAAGAGTACCATAGAATTTGAGGAAGATTGGGAAGTTCTTGGAGGGATATCCAGAGTTAATTCTGTCAAAACTTCCAAAACTCACTAG 1236 0.4272 MGNCYSHDDPYAGKVNREVDDKDYNLREENDFTNGDGEARIRLRGSSRFVSMYTQQGSKGINQDALTVWENFTGDKDMVFCGVFDGHGPLGHKVSQYIRDNLPSKLSASIKMSQQKACKYYDTYFPDRDNNVYVHCDNNKIMSLASWEGSLTKSFNEMDEDVARDINTDSFVSGATAVTVIKQGDHLIVSNLGDSRAVLCTRGDKEELIPVQLTVDLKPDIPSEAIRIHNCEGRVVPASEESDVCRIYMPDENCPGLAMSRAFGDFCLKDYGLISVPDIFYRKLTKQDQFVVLATDGVWDVLTNIEVVSIVASAPSRSMAAKLLVKHAVGAWRFKYPFAKVDDCAVICLFLDGQPGKKRCQKKHLRRRRSKSTRHEDNESLDGKSTIEFEEDWEVLGGISRVNSVKTSKTH 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2124 411 Pfam Protein phosphatase 2C 67 328 IPR001932 -
Glsi07g2124 411 CDD PP2Cc 48 351 IPR001932 -
Glsi07g2124 411 SUPERFAMILY PP2C-like 46 353 IPR036457 -
Glsi07g2124 411 ProSiteProfiles PPM-type phosphatase domain profile. 49 351 IPR001932 -
Glsi07g2124 411 SMART PP2C_4 39 349 IPR001932 -
Glsi07g2124 411 MobiDBLite consensus disorder prediction 362 382 - -
Glsi07g2124 411 PANTHER PROTEIN PHOSPHATASE 47 349 IPR015655 GO:0004722|GO:0006470
Glsi07g2124 411 Gene3D - 43 352 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2124 Glsi-ChrGlsi07 65614904 65617673 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2124 18 355 PP2C-type Phosphatase Gene Family AT5G01700 50.888 6.48e-118 347
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Glsi06g1989 06 67219928 67222562 Glsi07g2124 07 65614904 65617673 CCT