Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2115 ATGTGCTTTTCTAGTTTATCTCCGTTAGAAGTAGCAATTTGGAGGCGTTTCCCCATACCTGAGATATGGGAGACAAGTTTCTTTTACCTCTGTATTCTGAAGCTAAAGCGGAGAATAACCACTTTGAACTCTGAAGGCAAAGCTTCGTACAAGTTTGTCCTATTTAGGCTGATGCTGTTAAAAAAATCTACAGTGGGTTTGGTTTTTGAAGGTCCTTCTTCAATGGAGGTGAAGGAAGGTATAACGAGGAAGAAGATAAGGATTTGGCCTACGTGGAAATGTGACTGGGGCCCTCCAGAATATCCGATACCATGTAGCCGTTGGAGTCCCGAGTCCTACATGCTCAGGCCTGGTCTCGCAAACCCAAACCGTTTTGCAGTTGAAAAAAAAAAAGTTCATAGGGGATTGGCGAAAGCAGAGAGTAGATTCTGTTCTTCACTTCTTTGCTTATCCATTATTGTTCCCACCACTTTACAAACACCTTCCTCGTTCATGGGAAACAATGAGCGGCATTGCAAAGATTTTTCCACCAACCCACCTCACTTACTGCTCTCTTCTGCAACTGAAATTCCCAAATGTCGGTCTCTAGCTGATGATAAATGGAAGACATGGAGGAATGAAACCTTTTCGCGTTTCCACTTTCGGAGCAATGTTTCAATCTACTTCCCCTTATTCCTGCTTCTAAATGTTCTTGCTTCTGCATTTCAACCTGTCTCAGGCCACCTTTGGGATGGGGGGGTTGTGACTCAAGCAGATTATCAAGCTCTAAGGGCTGTTAAGCACGAACTGATAGATTTCAGAGGGGTCCTGAGAAGCTGGAATGATAGTGGCTTAGGAGCTTGTTCAGGTGGGTGGGCAGGAATCAAGTGCGTGAATGGACAAGTTATTGCAATTCAGCTTCCTTGGAGAGGACTAGGTGGTCGAATCTCGGAGAAAATTGGACAGCTTCAAGCTCTTAGGAAGCTCAGTCTCCATGACAATGTTCTTGCTGGTCCTGTCCCTTGGTCTCTTGGCTTCCTTCCTAATCTCAGAGGAGTTTATCTCTTCAATAATAGGTTTTCAGGTTCTATTCCTCCTTCCCTTGGTAATTGCCCAATGCTTCAGTCTCTGGATATTAGCAATAACTCACTCACTGGTAAAATCCCTCCCAGTTTAGCAAACTCCACTAGGTTATTCAGACTCAATTTGAGCTTCAACTCTCTATCTGGATCCATTCCTAGAACTTTTACTCAGTCTCCATCTCTAACTATTTTTGCTCTCGAACACAACAATCTTTCAGGTTCTATCCCAGATTCTTGGGGTGGAATGGGAAAGAAAACCTTCCAACTTCAAGTCCTGACCCTTGATCACAACGTCATTTCTGGCAGCATTCCAGTTTCTTTAAGCAAGCTGGGTTGGCTTGAAGAGATTTCTTTAAGTCATAATCAGATTGTAGGGTTCATTCCAAGTGAATTAGGTGGACTTTCAAGGCTTAGAATTATTGATCTATCAAGAAATGCCATCAAGGGAAGCTTTCCTGCTAGCTTTTCTAACTTGTCTTCTCTGGTTTCATTGAACCTTGAAGGCAATCAACTTGAAAACCATATCCCAGATACTCTAGACAGGTTAAGAAATCTTTCTGTGCTTAACCTGAAGAACAACAAACTTAAAGGTCAAATCCCATCAACAATTGGTAACATCTCAAGCATTACCCAAATTGATTTCTCTGAAAATAAACTCGTGGGAGAAATTCCAGATTCACTAACTAAACTTCCAAACCTTAGTTCTTTCAATGTTTCTTATAACAATCTGTCTGGCCCTGTTCCATCTCTCCTTTCCAAAAGATTCAATTCAAGCTCTTTCACAGGGAATCTTCAGCTATGTGGGTATAGCGCTTCAAAACCATGCCCTTCTCCACCCCCAGCTCGGAATCCTCTATCTCCAATCTCAGCACCTTCTTTGAAGCTTCATCACCGTAAACTAAGTACCAAGGACAGAATCCTGATAGCAGCAGGTGCTTTACTTCTAATTCTTCTATTACTCTTCTGCATTTTGCTTTGTTGTTTGATCAGGAAAAGGGTTGCTTCACAAGGAAAGAGTGGAAAAACAGCCAAGGAAGTAGCTGCTAGAAGTGTTGAAAAAGGTGCCCCTGCTGGTGCTGAAGTTCAGGCAGGAGGTGAAGCTGGAGGGAAACTAGTTCACTTCGATGGACCTTTTGTCTTTACAGCTGATGATCTTTTGTGTGCCACTGCGGAGATAATGGGAAAAAGTGCATATGGAACAGCATACAAGGCAACATTGGAAGATGGAAACGAAGTTGTTGTTAAAAGGTTGAGGGAGAAGACTACTAAAGGGCAGAAGGAGTTTGAAACTGAGGTTGCTACGCTTGGCAAAATTCGACACCCAAATCTCTTGGCCCTTAGAGCCTTCTACATAGGACCAAAAGGAGAGAAGCTTCTTGTCTTTGATTACATGCCCAAGGGAAGTCTTGCGTCATTCCTTCATGCTCGGGGGCCAGAAATTGTCATTGACTGGCCAACAAGGATGAAAATAGCCATTGGAGTGACACGTGGCCTGTGCTACCTCCACACCCAAGAGAACATAGTACATGGGAATCTCACCTCAAGCAACATACTATTAGATGAGAAGATAAATGCCCATATCACAGACTTTGGTCTTTCAAGGTTAATGACGCCTTCTGCCAACACCAACATCATTGCCACAACGGGAAGTCTTGGTTATAATGCACCAGAGCTTTCAAAGACCAAGAAGCCCCACACAAAGACTGATGTTTATAGCCTTGGCGTCGTCATTTTGGAACTCTTAACTGGTAAACCACCTGGGGAGCCAATCAATGGCATGGATTTGCCACAATGGGTGGCGTCTATAGTGAAGGAGGAATGGACAAATGAAGTTTTTGATTTGGAGATCATGAGGGATGCAACAACCATAGGGGATGAGTTGCTTAATACATTGAAATTGGCTCTGCATTGTGTGGATCCATCTCCAGCAGCAAGGCCAGAAGTTCAGCAAGTTCTCCAGCAACTGGAGGAGATCAAGCCAGACTTGGCTGCTCCTTCAGGGGATGATGGAGCTGAAGCCTAG 3084 0.4361 MCFSSLSPLEVAIWRRFPIPEIWETSFFYLCILKLKRRITTLNSEGKASYKFVLFRLMLLKKSTVGLVFEGPSSMEVKEGITRKKIRIWPTWKCDWGPPEYPIPCSRWSPESYMLRPGLANPNRFAVEKKKVHRGLAKAESRFCSSLLCLSIIVPTTLQTPSSFMGNNERHCKDFSTNPPHLLLSSATEIPKCRSLADDKWKTWRNETFSRFHFRSNVSIYFPLFLLLNVLASAFQPVSGHLWDGGVVTQADYQALRAVKHELIDFRGVLRSWNDSGLGACSGGWAGIKCVNGQVIAIQLPWRGLGGRISEKIGQLQALRKLSLHDNVLAGPVPWSLGFLPNLRGVYLFNNRFSGSIPPSLGNCPMLQSLDISNNSLTGKIPPSLANSTRLFRLNLSFNSLSGSIPRTFTQSPSLTIFALEHNNLSGSIPDSWGGMGKKTFQLQVLTLDHNVISGSIPVSLSKLGWLEEISLSHNQIVGFIPSELGGLSRLRIIDLSRNAIKGSFPASFSNLSSLVSLNLEGNQLENHIPDTLDRLRNLSVLNLKNNKLKGQIPSTIGNISSITQIDFSENKLVGEIPDSLTKLPNLSSFNVSYNNLSGPVPSLLSKRFNSSSFTGNLQLCGYSASKPCPSPPPARNPLSPISAPSLKLHHRKLSTKDRILIAAGALLLILLLLFCILLCCLIRKRVASQGKSGKTAKEVAARSVEKGAPAGAEVQAGGEAGGKLVHFDGPFVFTADDLLCATAEIMGKSAYGTAYKATLEDGNEVVVKRLREKTTKGQKEFETEVATLGKIRHPNLLALRAFYIGPKGEKLLVFDYMPKGSLASFLHARGPEIVIDWPTRMKIAIGVTRGLCYLHTQENIVHGNLTSSNILLDEKINAHITDFGLSRLMTPSANTNIIATTGSLGYNAPELSKTKKPHTKTDVYSLGVVILELLTGKPPGEPINGMDLPQWVASIVKEEWTNEVFDLEIMRDATTIGDELLNTLKLALHCVDPSPAARPEVQQVLQQLEEIKPDLAAPSGDDGAEA 1027
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2115 1027 FunFam Leucine-rich repeat receptor-like protein kinase 727 817 - -
Glsi07g2115 1027 Gene3D Transferase(Phosphotransferase) domain 1 819 1020 - -
Glsi07g2115 1027 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE IMK3-RELATED 442 1012 - -
Glsi07g2115 1027 FunFam Leucine-rich repeat receptor-like kinase 252 362 - -
Glsi07g2115 1027 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 363 437 - -
Glsi07g2115 1027 CDD STKc_IRAK 747 1012 - -
Glsi07g2115 1027 Pfam Leucine rich repeat N-terminal domain 251 290 IPR013210 -
Glsi07g2115 1027 Gene3D Ribonuclease Inhibitor 504 630 IPR032675 -
Glsi07g2115 1027 Gene3D Ribonuclease Inhibitor 408 503 IPR032675 -
Glsi07g2115 1027 Gene3D Ribonuclease Inhibitor 249 407 IPR032675 -
Glsi07g2115 1027 ProSiteProfiles Protein kinase domain profile. 741 1016 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g2115 1027 FunFam Pollen receptor-like kinase 1 818 1021 - -
Glsi07g2115 1027 Pfam Leucine rich repeat 367 425 IPR001611 GO:0005515
Glsi07g2115 1027 Pfam Leucine rich repeat 467 525 IPR001611 GO:0005515
Glsi07g2115 1027 Pfam Leucine rich repeat 537 597 IPR001611 GO:0005515
Glsi07g2115 1027 Gene3D Phosphorylase Kinase; domain 1 747 818 - -
Glsi07g2115 1027 SUPERFAMILY L domain-like 289 627 - -
Glsi07g2115 1027 SMART LRR_typ_2 340 364 IPR003591 -
Glsi07g2115 1027 SMART LRR_typ_2 488 511 IPR003591 -
Glsi07g2115 1027 SMART LRR_typ_2 584 607 IPR003591 -
Glsi07g2115 1027 SMART LRR_typ_2 464 487 IPR003591 -
Glsi07g2115 1027 SMART LRR_typ_2 536 560 IPR003591 -
Glsi07g2115 1027 SMART LRR_typ_2 512 535 IPR003591 -
Glsi07g2115 1027 PRINTS Leucine-rich repeat signature 367 380 - -
Glsi07g2115 1027 PRINTS Leucine-rich repeat signature 536 549 - -
Glsi07g2115 1027 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 438 632 - -
Glsi07g2115 1027 Pfam Protein tyrosine and serine/threonine kinase 745 1009 IPR001245 GO:0004672|GO:0006468
Glsi07g2115 1027 SUPERFAMILY Protein kinase-like (PK-like) 745 1015 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2115 Glsi-ChrGlsi07 65493002 65497754 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2115 241 1014 Receptor kinase-like Gene Family AT3G51740 69.755 0.0 1031
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Glsi07g2115 PK_Tyr_Ser-Thr 1.3e-39 CL0016