Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2096 ATGGCTTCAACACCGTTAGCATTTGGTTTTCTCCTCTTTTTTTCTCTCCTAACTGCTTCCAAGGCTCAACAAGAGACCAACTTTGTCTTCCCCGGATTCAATAATCGTGAAAACAATCTAGACCTTGAAGGAGCTTCCATTATCAAATCCAGTGCCCCCAAAACAAAATTTCCAGAGGCTGCTTCTGAGCATTTTCTTGGTCTTTTTAACTCCTCCAATGACGGGAACCCCTCAAATCATATATTTGCAGTGGAATTTGATACCGTTAATGGCTACAAAGGTGACTCTGACACTGAAGGGAACCATGTCGGGGTGAACCTCAATGGCATGGTCTCAAATATCACTGAACCAGCAGCTTATATTGAAGAAGGAACAAAAGCTCAAAAGGAGGAGTTCAGTATGGAGAAATCTGATGCTGTTCATGCTTGGATAGATTATGATGGTGAAAAGAGAATTGTGAATGTGACCATAGCTCCTTTATCATTACCAAAACCCTCCAAACCCCTTATTTCTCATACCATTGACCTTAACACTGTTTTTAAGGAAACCATGTTTATTGGTTTCTCAGCATCTACAGGGAAAAAGGCAAGCTCCCATTACATTCTAGGATGGAGCTTTGCAATGAATGGAACTGCTCCTCCACTCAACATTTCCCAGCTTCCAAACCCACCATCAAGGGAAAAAGCCCCATCTTCTTTTCCTTGGGTCAAGTTTACCATTGCCATTTTTTCTGCTTTAACCCTAATCTTGTTGGTTCTTTTGTGTTCTGTAACGTTGTACAAGAGGTACATGCAGTTTGAGACTCTTGAGGATTGGGAGCTAGATTGTCCTCACAGATTCAGATACAGAGATCTTCACATAGCAACAAAGGGGTTCAAAGAGAGTGAGCTACTAGGAATTGGAGGCTTTGGCGCTGTCTATAAAGGTATCTTACCTTCTTCAGGAACTGAGGTTGCTGTGAAGAGGATTCTGAGAAACCCAGTCCATGGATTGAGGGAATTTGCTGCTGAAATTGAAAGCTTAGGAAGATTAAGGCATAAAAATTTAGTCAATCTTCAAGGATGGTGTAAGCAAAAGAATGATCTACTTCTAGTCTATGACTTCATTCCTAATGGAAACCTTGCTTCACTTCTCTTCAATGGTAGTAACAGCTTTGTTTTGGATTGGGACCAAAGATTCGATATCGTCAAAGGCATAGCTTCAGGGCTATTATATCTTCATGAAGAATGGGAGCAAGTGGTGATCCATAGAGATGTAAAAACTAGCAATATTCTCATAGATGGAGACATGAAAGCCAGATTAGGTGATTTTGGTCTAGCAAGGCTATATGATCATGGGGAAGTATCACACACAACCAATGTGGTTGGGACTATCGGGTATATAGCAGCAGAATTAACTCGCACAGGAAAGGCATCCACAAGCTCTGATGTATATGCATATGGGGTTTTGCTCCTTGAAGTGGTCACTGGGAAGAGACCAATTGGGTCAGAGCAGTTTTTGTTGGTGGATTGGGTAGTGGAAAATCACCATCTGGGTCAGATTCTTGAAGTGACTGACCCTAAGTTGAACTCAGTTTATGTGGAGGAAGAAGTGGAATTGGTTTTGAAACTGGGTCTTCTGTGTGCTCAACACAAAGCAGATTCTAGGCCTACAATGAGACAAGTGACAAGGTATTTAAACTTTGATGACCCTCTTCCTGATGCCGGTGTTTGGAGGCACAGTGAGTCTCAGAGCTGCAGAATGAGCTCAGATTTCTTAGAAGCTGTTTCTACAAGTAACGTCTCAACGTCATACAATTTATCCTCCATCATTACGAATAGCATGTCTATAGAAGCTGGTAGATAG 1845 0.4168 MASTPLAFGFLLFFSLLTASKAQQETNFVFPGFNNRENNLDLEGASIIKSSAPKTKFPEAASEHFLGLFNSSNDGNPSNHIFAVEFDTVNGYKGDSDTEGNHVGVNLNGMVSNITEPAAYIEEGTKAQKEEFSMEKSDAVHAWIDYDGEKRIVNVTIAPLSLPKPSKPLISHTIDLNTVFKETMFIGFSASTGKKASSHYILGWSFAMNGTAPPLNISQLPNPPSREKAPSSFPWVKFTIAIFSALTLILLVLLCSVTLYKRYMQFETLEDWELDCPHRFRYRDLHIATKGFKESELLGIGGFGAVYKGILPSSGTEVAVKRILRNPVHGLREFAAEIESLGRLRHKNLVNLQGWCKQKNDLLLVYDFIPNGNLASLLFNGSNSFVLDWDQRFDIVKGIASGLLYLHEEWEQVVIHRDVKTSNILIDGDMKARLGDFGLARLYDHGEVSHTTNVVGTIGYIAAELTRTGKASTSSDVYAYGVLLLEVVTGKRPIGSEQFLLVDWVVENHHLGQILEVTDPKLNSVYVEEEVELVLKLGLLCAQHKADSRPTMRQVTRYLNFDDPLPDAGVWRHSESQSCRMSSDFLEAVSTSNVSTSYNLSSIITNSMSIEAGR 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2096 614 FunFam L-type lectin-domain containing receptor kinase S.4 369 571 - -
Glsi07g2096 614 CDD STKc_IRAK 298 560 - -
Glsi07g2096 614 ProSiteProfiles Protein kinase domain profile. 292 561 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g2096 614 Gene3D - 25 212 - -
Glsi07g2096 614 PANTHER - 25 562 - -
Glsi07g2096 614 Pfam Legume lectin domain 26 221 IPR001220 GO:0030246
Glsi07g2096 614 CDD lectin_legume_LecRK_Arcelin_ConA 25 210 IPR001220 GO:0030246
Glsi07g2096 614 Gene3D Phosphorylase Kinase; domain 1 277 368 - -
Glsi07g2096 614 FunFam serine/threonine-protein kinase PBS1-like 261 368 - -
Glsi07g2096 614 SUPERFAMILY Protein kinase-like (PK-like) 276 577 IPR011009 -
Glsi07g2096 614 Gene3D Transferase(Phosphotransferase) domain 1 369 563 - -
Glsi07g2096 614 SUPERFAMILY Concanavalin A-like lectins/glucanases 79 314 IPR013320 -
Glsi07g2096 614 SMART serkin_6 292 559 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g2096 614 ProSitePatterns Serine/Threonine protein kinases active-site signature. 414 426 IPR008271 GO:0004672|GO:0006468
Glsi07g2096 614 Pfam Protein kinase domain 292 556 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g2096 614 ProSitePatterns Protein kinases ATP-binding region signature. 298 321 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2096 Glsi-ChrGlsi07 65275470 65277496 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2096 52 591 Receptor kinase-like Gene Family AT3G08870 54.182 0.0 568
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi07g2096 Pkinase 1.8e-46 CL0016