Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2091 ATGGCCACTGCCTCAGCTTACCAAGAGCAACTTCCTGCATCTCCTTATTGGCTAAACAAAGGAGATAACGCATGGCAAATGACAGCAGCTACTCTGGTGGGTCTACAAAGCATGCCAGGCCTTGTGATTCTATATGCCAGCATCGTCAAGAAGAAATGGGCAGTGAACTCTGCTTTCATGGCTCTCTATGCTTTCGCTGCTGTGCTCATCTGTTGGGTCCTTGTTTGTTACCGAATGGCCTTTGGAGATAAACTCCTTCCCTTCTGGGGCAAGGGTGCCCCAGCTCTAGGCCAAAAGTTCCTTATAAGCCGAGCCAAAGTCCCTGAAAGCACCCACTACCACAAAAATGGCACTAAAGAAACCCCAATGGTGGAACCCTTCTTTCCTATGGCTTCCCTTGTCTATTTCCAATTCACTTTTGCAGCTATCACCCTTATCTTACTAGCTGGTTCTGTTCTTGGCCGCATGAACATCAAGGCCTGGATGGCTTTTGTCCCCCTTTGGCTCATTTTCTCATACACCGTTGGTGCATTCAGCCTCTGGGGTGGTGGCTTCCTCTACCACTGGGGGGTCATCGATTACTCCGGCGGCTATGTCATCCACCTCTCCTCCGGCATCGCCGGCTTCACCGCCGCATACTGGGTTGGACCAAGGTTGAAGAGCGACAGAGAGAGATTCCCACCGAATAATGTGCTGCTGATGCTTGCGGGTGCTGGGTTACTATGGATGGGTTGGTCGGGGTTCAATGGAGGAGCACCATATGCAGCAAGCATTGACTCTTCCATGGCTGTGTTGAACACGAACATTTGTGCAGCCACAAGCCTTCTCGTATGGACGTCTCTTGACGTCGTTTTCTTCGGTAAACCTTCGGTGATCGGAGCTGTTCAGGGTATGATGACCGGACTTGTTTGCATCACCCCAGGAGCAGGGTTAGTTCAATCGTGGGCGGCCATAATAATGGGAATTCTATCGGGAAGCATTCCATGGGTCTCCATGATGGTTCTTCACAAGAAGTCAAGTATTCTTCAGAAGGTAGATGACACCCTTGGAGTATTTCACACACACGCAGTGGCAGGGCTTTTGGGAGGACTTCTCACAGGTCTATTAGCAGAACCACAACTTTGCAGGCTAGCATTGCCGGTGAAGAACTCGAGGGGTGCCTTCTACGGCGGAAGCGGTGGCGTACAGTTCCTGAAGCAGATAGTGGGAGCCCTATTTGTGATAGGATGGAACTTAGTCTCCACCACTATCATTCTTCTTGCCATTCGATTGTTCATACCCTTGAGGATGCCGGACGAGCAGCTCGAGATTGGGGATGACGCCGTGCATGGAGAGGAAGCTTATGCCCTATGGGGTGATGGAGAGAAATTTGACCCAACCAAGCATGGAACCTCAAGCGTGCATAGAACTTCGGCATCACCTTATGTGAATGGTGCAAGAGGTGTTACCATAAATTTATGA 1461 0.5038 MATASAYQEQLPASPYWLNKGDNAWQMTAATLVGLQSMPGLVILYASIVKKKWAVNSAFMALYAFAAVLICWVLVCYRMAFGDKLLPFWGKGAPALGQKFLISRAKVPESTHYHKNGTKETPMVEPFFPMASLVYFQFTFAAITLILLAGSVLGRMNIKAWMAFVPLWLIFSYTVGAFSLWGGGFLYHWGVIDYSGGYVIHLSSGIAGFTAAYWVGPRLKSDRERFPPNNVLLMLAGAGLLWMGWSGFNGGAPYAASIDSSMAVLNTNICAATSLLVWTSLDVVFFGKPSVIGAVQGMMTGLVCITPGAGLVQSWAAIIMGILSGSIPWVSMMVLHKKSSILQKVDDTLGVFHTHAVAGLLGGLLTGLLAEPQLCRLALPVKNSRGAFYGGSGGVQFLKQIVGALFVIGWNLVSTTIILLAIRLFIPLRMPDEQLEIGDDAVHGEEAYALWGDGEKFDPTKHGTSSVHRTSASPYVNGARGVTINL 486
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2091 486 PRINTS Rhesus blood group protein signature 356 372 IPR002229 GO:0005886
Glsi07g2091 486 PRINTS Rhesus blood group protein signature 318 336 IPR002229 GO:0005886
Glsi07g2091 486 PRINTS Rhesus blood group protein signature 137 153 IPR002229 GO:0005886
Glsi07g2091 486 PRINTS Rhesus blood group protein signature 263 285 IPR002229 GO:0005886
Glsi07g2091 486 PRINTS Rhesus blood group protein signature 232 250 IPR002229 GO:0005886
Glsi07g2091 486 PANTHER AMMONIUM TRANSPORTER MEP2 8 460 IPR001905 GO:0008519|GO:0016020|GO:0072488
Glsi07g2091 486 Pfam Ammonium Transporter Family 24 448 IPR024041 GO:0008519|GO:0016020|GO:0072488
Glsi07g2091 486 NCBIfam ammonium transporter 22 448 IPR001905 GO:0008519|GO:0016020|GO:0072488
Glsi07g2091 486 Gene3D Ammonium transporter AmtB like domains 2 451 IPR029020 -
Glsi07g2091 486 ProSitePatterns Ammonium transporters signature. 193 218 IPR018047 GO:0008519|GO:0016020|GO:0072488
Glsi07g2091 486 SUPERFAMILY Ammonium transporter 17 430 - -
Glsi07g2091 486 FunFam Ammonium transporter 6 451 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2091 Glsi-ChrGlsi07 65224747 65229656 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2091 130 486 Inorganic Solute Cotransporters AT2G38290 77.716 0.0 552