Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2084 ATGTTAGTGGGAGCACCAGGTAGCGGCAAGTCCACTTTCTGCGAAGAAGTTATGCGCTCCTCAATTCGTCCTTGGATTCGCATTTGCCAGGACACCATTGGAAATGGTAAAGCAGGAAATAAAACTCAGTGCCTAAGCAGTGCAGCTACAGCGTTGAAGGATGGAAAGAGTGTATTTATTGACAGGTGCAATCTTGATAGAGAACAACGTTCAGGATTTATAGAGCTTGGTGGACCCCAAATAGATGTGCATGCAGTTGTGCTTGATCTTCCTGCAAAGCTTTGTATTTCTCGATCTGTCAAACGGACTGGGCATGAAGGAAATTTGCAGGGTGGAAAAGCTGCTGCAGTTGTGAATAGAATGCTTCAAAAGAAAGAGTTGCCTAAGTTAAGTGAAGGGTTTAACCGGATAACATTTTGTCAGAATGAGAGTGATGTCAAGGTGGCTATTAATACATACAGTGCACTTGGGCCACTGGATAACCTTCCACATGGATGCTTTGGACAGAAGAGTCCAGATGCCAAAGTTCAAGTAGGCATAATGAAGTTCTTGAAAAAAGCAGAGGTCCCAGTTGCTGCTGAGTCTAGAGAGAATAGTATTAGAAATTCTACTTCTTCCCAAACTATTGATATGATGGATTGCAGTAAAGATATGAAAAATGTTTCTTCATATTCAGATAATGCCAATTCAGTGCTAAAGAAAGTAGAAAACCTGGCAGGTGGCTCCACTGGTTCCCATGTCAATCAAAATTTACTGGATCATGTTCCCACTCTGGCATTTCCATCTATTTCAACATCTGATTTCCAATTTGACCATGAGAAGGCAGCAGATATCATTGTGGAGAAAGTGGCAGAGTTCTCAAATAAGCTTGGGAATGCCAGACTTGTTTTAGTTGATTTGACTCATGGGTCAAAGATTCTGTCTTTAGTTAAAGCCAAAGCTGCACAAAAAAACTTAGACTCGAGAAATTTTTTTACCCATGTTGGGGACATTACTCATCTTTATTCCACAGGAGGTTTGCGTTGTACTGTGATAGCTAATGCTGCCAATTGGCGGTTGAAACCTGGGGGTGGAGGTGTTAATGCTGCAATTTTCAAGGCTGCAGGTCCTTCCCTGGAGTCTGCAACCAAAGAACAAGCACAATGTATTTCACCTGGGAATGCTGTTGTTGTCCCTCTACCTTCATCTTCTCCTTTGTTTACTAGGGAGGGAGTAACCCATGTAATACATGTTCTTGGACCAAATATGAACCCACAAAGGCCAGATTGTCTCAATAAGGATTACAATAAAGGCTGCAAGATTCTCCAAGAGGCTTACACTTCACTATTTGAAGCTTTTGCATCAATTGTGAGGACCCGGGCAGAGCAATCTGTTTGGAGAAATGAAAGCCTTGGCAATAAGTCTTTGAAGCTGCAGGATCAGTCTGAACGTTGTCCTAGAAATCATGCCACAAACACTGAACAAAAAAGCAAGAGAGGTGAAGTTCATGGATCTGAAAAGAACAAGAAATACAAAGGAACTCAGGATGTTGAAGTGAATTTTGCTGATTCCACGGTTGAAAAGGTAGATTCAGGGAATAGGAAAACTGATGGTGGCATGAATAAGGCATGGGGATCATGGGCTCAAGCTCTTCATCAAATTGCAATGCATCCTGAAAAACATAAGGACAATTTGCTTGAAATATCAGAAGATGTTGTTGTACTGAATGATCTGTATCCCAAGGCACAGAAGCATGTTCTGGTGTTGGCACAAACTGGCGGCCTTGATTGCCTCGCTGATGTCCAAAATGACCACCTTCCCTTATTAAAGAAGATGCATGCTGTGGGTTTAAAGTGGGCTCAGAAGTTCTTGCATGAGAATGCTTCATTGGTTTTTCGTCTTGGATATCACTCGCTTTTCGTGCGTGCGTCTACCATGCTTTTTGTTGCTGCTTTTTTGTTCACGGTTTTTGGTGTATGTAAGCTGAACCTTTCAGCTCCATCAATGCGACAACTACATTTGCATGTTATTAGCCAGGATTTTGATTCGAAACATTTGAAGCATAAGAAGCACTGGAACTCTTTTAACACTGCTTTCTTCCGTGACTCAGTAGATGTAATTGATGAGGTCTCTAATCATGGGAAAGCAACATTGAAAGATGATGACAAGCTGCTGTCCATGGAGTTGAGGTGCCATAGATGCAGAAGTGCACATCCAAACATACCCCGGTTAAAATCACATATTAGCAGTTGCCAAGCTCCCTTTCCTGCTTACCTACTTCAAAATGGTCGTTTAGTGCATACTTCAGGTGAAGCTGGGATTAATTCATAG 2310 0.4195 MLVGAPGSGKSTFCEEVMRSSIRPWIRICQDTIGNGKAGNKTQCLSSAATALKDGKSVFIDRCNLDREQRSGFIELGGPQIDVHAVVLDLPAKLCISRSVKRTGHEGNLQGGKAAAVVNRMLQKKELPKLSEGFNRITFCQNESDVKVAINTYSALGPLDNLPHGCFGQKSPDAKVQVGIMKFLKKAEVPVAAESRENSIRNSTSSQTIDMMDCSKDMKNVSSYSDNANSVLKKVENLAGGSTGSHVNQNLLDHVPTLAFPSISTSDFQFDHEKAADIIVEKVAEFSNKLGNARLVLVDLTHGSKILSLVKAKAAQKNLDSRNFFTHVGDITHLYSTGGLRCTVIANAANWRLKPGGGGVNAAIFKAAGPSLESATKEQAQCISPGNAVVVPLPSSSPLFTREGVTHVIHVLGPNMNPQRPDCLNKDYNKGCKILQEAYTSLFEAFASIVRTRAEQSVWRNESLGNKSLKLQDQSERCPRNHATNTEQKSKRGEVHGSEKNKKYKGTQDVEVNFADSTVEKVDSGNRKTDGGMNKAWGSWAQALHQIAMHPEKHKDNLLEISEDVVVLNDLYPKAQKHVLVLAQTGGLDCLADVQNDHLPLLKKMHAVGLKWAQKFLHENASLVFRLGYHSLFVRASTMLFVAAFLFTVFGVCKLNLSAPSMRQLHLHVISQDFDSKHLKHKKHWNSFNTAFFRDSVDVIDEVSNHGKATLKDDDKLLSMELRCHRCRSAHPNIPRLKSHISSCQAPFPAYLLQNGRLVHTSGEAGINS 769
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2084 769 Gene3D - 539 747 IPR036265 -
Glsi07g2084 769 FunFam Transcription factor bHLH140 304 451 - -
Glsi07g2084 769 Gene3D Leucine Aminopeptidase, subunit E, domain 1 303 450 IPR043472 -
Glsi07g2084 769 ProSiteProfiles Macro domain profile. 311 580 IPR002589 -
Glsi07g2084 769 Gene3D Leucine Aminopeptidase, subunit E, domain 1 212 302 IPR043472 -
Glsi07g2084 769 FunFam Transcription factor bHLH140 1 155 - -
Glsi07g2084 769 Pfam Macro domain 346 422 IPR002589 -
Glsi07g2084 769 Pfam Scavenger mRNA decapping enzyme C-term binding 546 631 - -
Glsi07g2084 769 Gene3D - 1 154 IPR027417 -
Glsi07g2084 769 SMART YBR022w_8 323 458 IPR002589 -
Glsi07g2084 769 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 140 IPR027417 -
Glsi07g2084 769 SUPERFAMILY HIT-like 537 728 IPR036265 -
Glsi07g2084 769 MobiDBLite consensus disorder prediction 470 504 - -
Glsi07g2084 769 Pfam C2HE / C2H2 / C2HC zinc-binding finger 689 742 IPR032566 -
Glsi07g2084 769 MobiDBLite consensus disorder prediction 473 504 - -
Glsi07g2084 769 PANTHER APRATAXIN-RELATED 258 744 - -
Glsi07g2084 769 Pfam AAA domain 1 124 - -
Glsi07g2084 769 SUPERFAMILY Macro domain-like 306 444 IPR043472 -
Glsi07g2084 769 SUPERFAMILY Macro domain-like 255 293 IPR043472 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2084 Glsi-ChrGlsi07 65125757 65130060 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2084 1 759 C2H2 Transcription Factor Family AT5G01310 57.687 0.0 864