Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2046 ATGGAGGGGCATCATCTCCATCACCACCTTCATCCTCAACAACAACATCAGCCCCAGCAGCAGCAGAATATTGGCGTCGTTACCGTTAACGTTGTTGATGTGAGCGATAGGTTCCCTCAGTGGAGTATTCAAGAGACGAAGGAGTTCTTGATGATCAGAGCAGAGCTTGATCAGACTTTCATGGAGACAAAGAGGAATAAGCAGCTTTGGGAAGTTATCTCGACCAGGATGAAGGAAAAGGGTTTCCATAGAAGTCCAGAACAGTGCAAGTGCAAGTGGAAAAACCTCGTCACCCGGTACAAGGGCTGTGAAACGATGGAGGCGGAAGGACTGAGACAGCAATTTCCTTTTTACAATGAACTTCAAGTGATTTTCAATGCAAGGATGCAGAGAATGGTGTGGGCAGAAGCCGAAGGAGGGTTGAAGAAGAAGGCGGTGCCGGTCTCGTCGGAAGATGAAGACGATAATGCAGGAGAAAGCGAGGGTGAGAAAGGTACTAGCAGCAGATCAAAGAAGAAGAAGGGTAAAATGATAAGTCCAGGAGGTACTGGCGGTAGCAGTAGTAGTAATAGTGGTTTGAACAATTTGAAGGAGATGTTGGGGGAGTTCATGAGGCAACAGATGCAAATAGAAGCTCAATGGATGGAAGCATTTGAGGCTAGAGAGACCGAGAGAAGGTTTAAGGAGCTAGAATGGAGGCAAACCATGGAAGCTTTGGAAAATGAGAAGATAATGATGGACCAGAGATGGAGAGAGAGGGAAGAGCAAAGAAGGATTAGAGAAGAAGCTAGGGCTGAAAAAAGGGATGCTCTAATCACAGCTCTGCTAAACAAGCTCAGAAGAGAGGAGATGTAG 855 0.4643 MEGHHLHHHLHPQQQHQPQQQQNIGVVTVNVVDVSDRFPQWSIQETKEFLMIRAELDQTFMETKRNKQLWEVISTRMKEKGFHRSPEQCKCKWKNLVTRYKGCETMEAEGLRQQFPFYNELQVIFNARMQRMVWAEAEGGLKKKAVPVSSEDEDDNAGESEGEKGTSSRSKKKKGKMISPGGTGGSSSSNSGLNNLKEMLGEFMRQQMQIEAQWMEAFEARETERRFKELEWRQTMEALENEKIMMDQRWREREEQRRIREEARAEKRDALITALLNKLRREEM 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2046 284 MobiDBLite consensus disorder prediction 1 21 - -
Glsi07g2046 284 MobiDBLite consensus disorder prediction 145 194 - -
Glsi07g2046 284 Pfam Myb/SANT-like DNA-binding domain 40 122 IPR044822 -
Glsi07g2046 284 PANTHER FI21293P1 15 280 - -
Glsi07g2046 284 FunFam Zinc finger and SCAN domain-containing 20 41 102 - -
Glsi07g2046 284 ProSiteProfiles Myb-like domain profile. 41 97 IPR001005 -
Glsi07g2046 284 CDD GT1 39 104 - -
Glsi07g2046 284 Gene3D - 41 102 - -
Glsi07g2046 284 Coils Coil 193 213 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2046 Glsi-ChrGlsi07 64685607 64686921 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2046 8 282 Trihelix Transcription Factor Family AT2G38250 53.214 2.00e-70 217
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Glsi07g2046 Myb_DNA-bind_4 3.8e-20 CL0123