Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2043 ATGAGTTCCAGTCGCTCGGATGGCTCTGCCAAAGAACGCCTTCGTTGGACTCAACAACTCCATGATTGGTTTGTGGAAGCTGTAAACAGGCTTGGAGGCCCTGATAGGGCAACACCAAAGAGTATCGTGAAGGAAATGAAGTCTATGGGTGTATCTGGATTGACCATTTATCATGTCAAAAGCCACTTGCAGAAATACAGGATCTCCAAGTTGATTCCAGAATCCACTACTAGTAATGCTCTTCAAGTAAAGGAAGCTCTACAAATGCAAATCGAAGTGCAAAAACGATTGAGTGATCAATTAGAGAGAAGCTTGAAGCTAAAAATAGAAGCCCAAGGAAGGTACCTGGAGAGGATGGAACATTATCACAACCAAAAGATGCCTAGAAAACCTGGGAAGCCTTTAGCAGCAGAAGCATCACTGCCATGTCTTTCTGAGGAGTCTGAAGAACAATCTTTGAATGCAAAACACAGTGATGAGTCCGATGTTGTAACACAGCCTCAACCTCAAGCAGTACTGAAAAAGCAAAGGGTCATCAAAGAGGGTGTTCTGCCAATTACAAGTTTGGATCTTGCACCGTCACCGTCATCATCATCATCACCAACCCTAGAATTCTGCAACCAAAGTTGGGATCTTTCTTGGAATCAGCTTGCTTCGTGTCAATCACCTCTGGTTCCCAGCTTTTTGTTGTGA 693 0.4387 MSSSRSDGSAKERLRWTQQLHDWFVEAVNRLGGPDRATPKSIVKEMKSMGVSGLTIYHVKSHLQKYRISKLIPESTTSNALQVKEALQMQIEVQKRLSDQLERSLKLKIEAQGRYLERMEHYHNQKMPRKPGKPLAAEASLPCLSEESEEQSLNAKHSDESDVVTQPQPQAVLKKQRVIKEGVLPITSLDLAPSPSSSSSPTLEFCNQSWDLSWNQLASCQSPLVPSFLL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2043 230 FunFam Two-component response regulator 7 71 - -
Glsi07g2043 230 MobiDBLite consensus disorder prediction 146 166 - -
Glsi07g2043 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 8 71 IPR017930 -
Glsi07g2043 230 Pfam Myb-like DNA-binding domain 14 67 IPR001005 -
Glsi07g2043 230 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 9 172 IPR044848 GO:0003700
Glsi07g2043 230 Coils Coil 84 104 - -
Glsi07g2043 230 Gene3D - 10 71 - -
Glsi07g2043 230 Pfam MYB-CC type transfactor, LHEQLE motif 81 119 IPR025756 -
Glsi07g2043 230 SUPERFAMILY Homeodomain-like 10 68 IPR009057 -
Glsi07g2043 230 NCBIfam myb-like DNA-binding domain, SHAQKYF class 11 69 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2043 Glsi-ChrGlsi07 64629442 64633626 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2043 2 170 G2-like Transcription Factor Family AT4G28610 39.487 2.69e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Glsi07g2043 Myb_DNA-binding 5.9e-07 CL0123