Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2041 ATGATAAAGATTTTCCTGTTAGTAAAATATTCACGTGCAGCCGAGCTCAGATATTATTCTGTGATTTGGTTCGGTGAGGTTCTGTTCTTCTTCCCCTTCCAATTCTCAGACCGGTTGAGAGAAACTCCAGCCAATAGGAATCGCAGCGGAAGAGAGAGAGAGAGATTTAGAGCTTCCACTGACAGAGAAGGCATGGGCGTCGACTACTACAAGATTCTTCAGGTAGACCGAAATGCCAAAGATGATGATCTCAAGAAAGCCTATCGGAAGCTTGCCATGAAATGGCACCCTGATAAGAATCCTAACAACAAGAAAGAGGCCGAAGCAAAATTCAAGCAAATCTCCGAGGCTTACGATGTTTTGAGTGATCCACAAAAGCGAGCAGTGTATGATCAGTTTGGTGAGGAAGGATTGATGGGACAGGCACCGCCCCCTGGTTCCGGTGGCTTTTCTGGTGGGCCAACGACGTTCCGGTTCAACCCCAGAAGCGCAGATGATATATTTTCGGAGTTATTTGGGTTTTCCAGTCCATTTGGTGGAATGGGCGATATGGGTGGTCGTGCTGGCGGTCCTGCCTTTCACCGGGATGTGTTCGGCGACGACATTTTCGCTTCATTTAGGAGTAGAGCTGGAGAGAGCTCAGGGAATATACCAAGGAAAGGTGCACCCATAGAGCGAACACTGCCATGTAGTTTGGAGGATTTGTATAAAGGTACTACGAAGAAAATGAAGATTTCGAGGGATGTTACTGATGCCACTGGGAAGTCCACCACAGTAGAGGAAATTCTTACAATTGAGATCAAGCCAGGTTGGAAGAAAGGAACGAAAATAACTTTTCCAGAGAAGGGAAATGAACAGAAAGGAGTTATACCTGCAGACCTTGTCTTTATTATTGATGAGAAACCTCATAGTGTCTTCAAGAGGGATGGCAACAATCTTGTTGTCACCCAGAAGATATCTCTTGTTGAAGCCCTGACAGGTTACACAGCACAGCTGACAACCCTTGATGGACGGAATCTTACCGTCCCCATCCACTCCATTATTAGTCCCACATACGAAGAAGTTGTTAAAGGAGAGGGTATGCCCATTCCCAAAGAGCCTTCCAGAAAGGGTAACTTGAGAATCAAGTTTAATGTCAAGTTTCCCTCCAGGCTTACGTCAGAGCAGAAGAGTGGCATTAAGCGATTATTGACATCCCCATAA 1203 0.458 MIKIFLLVKYSRAAELRYYSVIWFGEVLFFFPFQFSDRLRETPANRNRSGRERERFRASTDREGMGVDYYKILQVDRNAKDDDLKKAYRKLAMKWHPDKNPNNKKEAEAKFKQISEAYDVLSDPQKRAVYDQFGEEGLMGQAPPPGSGGFSGGPTTFRFNPRSADDIFSELFGFSSPFGGMGDMGGRAGGPAFHRDVFGDDIFASFRSRAGESSGNIPRKGAPIERTLPCSLEDLYKGTTKKMKISRDVTDATGKSTTVEEILTIEIKPGWKKGTKITFPEKGNEQKGVIPADLVFIIDEKPHSVFKRDGNNLVVTQKISLVEALTGYTAQLTTLDGRNLTVPIHSIISPTYEEVVKGEGMPIPKEPSRKGNLRIKFNVKFPSRLTSEQKSGIKRLLTSP 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2041 400 Pfam DnaJ C terminal domain 224 382 IPR002939 -
Glsi07g2041 400 CDD DnaJ 68 123 IPR001623 -
Glsi07g2041 400 Pfam DnaJ domain 68 131 IPR001623 -
Glsi07g2041 400 SUPERFAMILY HSP40/DnaJ peptide-binding domain 305 391 IPR008971 GO:0006457|GO:0051082
Glsi07g2041 400 Gene3D DnaJ domain 67 182 IPR036869 -
Glsi07g2041 400 SUPERFAMILY Chaperone J-domain 67 156 IPR036869 -
Glsi07g2041 400 Gene3D - 223 301 - -
Glsi07g2041 400 SMART dnaj_3 67 126 IPR001623 -
Glsi07g2041 400 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 65 397 - -
Glsi07g2041 400 FunFam DnaJ subfamily B member 13 67 182 - -
Glsi07g2041 400 SUPERFAMILY HSP40/DnaJ peptide-binding domain 224 303 IPR008971 GO:0006457|GO:0051082
Glsi07g2041 400 FunFam DnaJ subfamily B member 13 303 383 - -
Glsi07g2041 400 ProSitePatterns Nt-dnaJ domain signature. 111 130 IPR018253 -
Glsi07g2041 400 ProSiteProfiles dnaJ domain profile. 68 134 IPR001623 -
Glsi07g2041 400 FunFam Dnaj homolog subfamily b member 220 301 - -
Glsi07g2041 400 Gene3D - 303 383 - -
Glsi07g2041 400 PRINTS DnaJ domain signature 70 88 IPR001623 -
Glsi07g2041 400 PRINTS DnaJ domain signature 106 126 IPR001623 -
Glsi07g2041 400 PRINTS DnaJ domain signature 88 103 IPR001623 -
Glsi07g2041 400 PRINTS DnaJ domain signature 126 145 IPR001623 -
Glsi07g2041 400 CDD DnaJ_C 222 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2041 Glsi-ChrGlsi07 64612350 64617951 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2041 69 131 C2H2 Transcription Factor Family AT1G74250 38.806 4.93e-09 56.2