Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2039 ATGGCAGCAACAACCAACCTGAACCATCTCTTCAAAACTTCCGTACCGAAGAAGCATAGGACCATAACAAGAACCGCGAGATCTGAAGTCACCGATGCGACGTCGTCTTCTCGCAGCAGCGCTCGGCAGCTGATAGGGTCCGGCACCGTCAGGGCCATAGAGCCCAAAGACGCTAACGGAGCGATGAGCTCGGAGGGGTTTGTGCTTCTGGACGTGAGGCCAAGGTGGGAGAGAGAGAAGGCACGTGTGAAAGGGTCTGTGCACGTGCCGATATTTGTGGAAGATACGGATGAGGGTGTTTTAACTCTGGTCAAGAAGTGGGTGCACTTTGGTTATATTGGCTTGTGGACTGGCCAGTATCTCACTACTCTTAACCCTGAGTTTCTTAGCCAAGTGGAAATGGCTATTGCTGATAAGGACACCAAGCTTCTTGTGGCATGCGGGGAAGGTTTGAGGTCAATGATAGCAGTGTCAAAGCTGTATGATGGAAGTTACAGAAATCTGGGATGGTTAGTTGGAGGGTTTAGTCGTGCAAGAGATAAAGACTTCCCAGCAGTGGAAGGCAAAGAAAAGTTGCAGTATGCCACTGTAGGGGGAGCTTCTTACTACTTCCTTCAGTTGCTCATACTCTTACAGGCTGTAAGTAAAGGATAA 654 0.4954 MAATTNLNHLFKTSVPKKHRTITRTARSEVTDATSSSRSSARQLIGSGTVRAIEPKDANGAMSSEGFVLLDVRPRWEREKARVKGSVHVPIFVEDTDEGVLTLVKKWVHFGYIGLWTGQYLTTLNPEFLSQVEMAIADKDTKLLVACGEGLRSMIAVSKLYDGSYRNLGWLVGGFSRARDKDFPAVEGKEKLQYATVGGASYYFLQLLILLQAVSKG 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2039 217 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 10 12 216 IPR044614 -
Glsi07g2039 217 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 48 189 IPR036873 -
Glsi07g2039 217 MobiDBLite consensus disorder prediction 27 43 - -
Glsi07g2039 217 FunFam Rhodanese-like domain-containing protein 10 50 194 - -
Glsi07g2039 217 CDD RHOD 57 176 - -
Glsi07g2039 217 SMART rhod_4 53 184 IPR001763 -
Glsi07g2039 217 ProSiteProfiles Rhodanese domain profile. 63 187 IPR001763 -
Glsi07g2039 217 MobiDBLite consensus disorder prediction 21 43 - -
Glsi07g2039 217 Gene3D - 50 197 IPR036873 -
Glsi07g2039 217 Pfam Rhodanese-like domain 55 176 IPR001763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2039 Glsi-ChrGlsi07 64586368 64589328 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2039 6 203 Sulfurtransferasese or Rhodanese AT3G08920 56.061 2.38e-79 235