Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2029 ATGGATCCTTTACGGTGCGCTGCCCCTCTGTTTAGAGATATCAGGCGATTGATGAAGAATCAGTCGTCTGGATCAGGCGACTGGTCCCTATTCAGGCAGAAAAAAGAACCAAGCTTCAGGGAGATCATGGCAGCAGAAATAACCAATGGTAGCACTAGCGGCTTATTCTGCCAATTGAAGCTCAGTGAGACTAGGGGAAAGATCATCACTTGCAAAGCTGCTGTTGCACATGGTCCGGGAGAGCCACTCGTGGTGGAGAAAGTTCAAGTTCATCCTCCCCAGAAAATGGAGGTTCGAATCAAGATCCTCTTCACTTCAATCTGTCATACTGATCTTAGCGCTTGGCAAGGCGAGAATGAGGCTCAGAGAGCTTATCCTCGAATCTTTGGCCATGAAGCATCTGGAATTGTTGAGAGCATTGGTGAAGGGGTGAGGGACTTAAGAGAAGGGGACTACGTCGTGCCGCTATTCAACGGGGAATGCGGTGAGTGCGGGCTATGCAAGTGCGAAAGAACCAACATGTGCGAGAGGTTCGGGGTGAACCCAATGAAGAAGGTGATGGACAGCGACGGTGGCACAAGGTTTTCAACCGTCGCCGACGGCAAACCCATCTTCCATTTCCTCAACACCTCCACGTTCACGGAGTACACCGTGGTTGACTCCGCCTGCGTGGTCAAGCTCCACCTCGGCGACGGCGACCTCAGCCTCAAGAAGCTTACCTTGCTTAGTTGCGGAGTGTCCACGGGCGTGGGAGCTGCATGGAACACGGCCAATGTGCATTCTGGTTCGACTGTGGCCGTCTTCGGTTTGGGCGCTGTGGGGCTTGCTGTGGTAGAAGGGTCCCGGGCCAGAGGTGCATCCAAAATAATAGGCGTGGACATCAACCCTGCCAAGTTCATCAAAGCCCGGGCAATGGGAGTGACGGACTTCATAAATCCCAGGGATGAAGAGAAGCCGGTACATGAGAGAATTAGAGAAATAAGTGGAGGAGGCGTACACTACAGCTTTGAATGTGCAGGAAACTCGGATGTTCTCCGAGATGCCTTCTTGTCTGCTCATGAGGGTTGGGGGTTGACTGTAGTATTGGGAATTCATCCATCCCCAAAAATGCTTCCAATCCACCCAATGGAGCTGTTCGTTGGTCGGAGAATAGTTGCTTCAGTCTTTGGTGGGTTCAAAGGGAAGACCCAGTTGCCTCATTTTGCCAAACAATGCATGCATGGAATGGTGAAGCTGGACGAGTTCATCACTCACGAGCTTCCCTTTGATGAGATTAACAAAGCCTTTGATCTTTTGATCACTGGACAATCACTGAGATGCCTTCTACACCTCTAA 1335 0.5109 MDPLRCAAPLFRDIRRLMKNQSSGSGDWSLFRQKKEPSFREIMAAEITNGSTSGLFCQLKLSETRGKIITCKAAVAHGPGEPLVVEKVQVHPPQKMEVRIKILFTSICHTDLSAWQGENEAQRAYPRIFGHEASGIVESIGEGVRDLREGDYVVPLFNGECGECGLCKCERTNMCERFGVNPMKKVMDSDGGTRFSTVADGKPIFHFLNTSTFTEYTVVDSACVVKLHLGDGDLSLKKLTLLSCGVSTGVGAAWNTANVHSGSTVAVFGLGAVGLAVVEGSRARGASKIIGVDINPAKFIKARAMGVTDFINPRDEEKPVHERIREISGGGVHYSFECAGNSDVLRDAFLSAHEGWGLTVVLGIHPSPKMLPIHPMELFVGRRIVASVFGGFKGKTQLPHFAKQCMHGMVKLDEFITHELPFDEINKAFDLLITGQSLRCLLHL 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2029 444 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 130 144 IPR002328 GO:0008270|GO:0016491
Glsi07g2029 444 Gene3D - 75 440 - -
Glsi07g2029 444 Gene3D - 249 387 - -
Glsi07g2029 444 FunFam Alcohol dehydrogenase 6 74 261 - -
Glsi07g2029 444 SUPERFAMILY GroES-like 64 268 IPR011032 -
Glsi07g2029 444 SUPERFAMILY GroES-like 393 443 IPR011032 -
Glsi07g2029 444 FunFam S-(hydroxymethyl)glutathione dehydrogenase 249 387 - -
Glsi07g2029 444 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 234 408 IPR036291 -
Glsi07g2029 444 Pfam Alcohol dehydrogenase GroES-like domain 97 199 IPR013154 -
Glsi07g2029 444 PANTHER ALCOHOL DEHYDROGENASE 66 441 - -
Glsi07g2029 444 Pfam Zinc-binding dehydrogenase 272 391 IPR013149 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2029 Glsi-ChrGlsi07 64491504 64503987 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2029 97 433 Monolignol Biosynthesis Gene Families AT2G21890 27.859 1.63e-12 67.0