Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2023 ATGGCTGTTAATGGTATGAACTTGGAATGTGGTCATAGAAAGAGTCTCTTTGCACCCCTGAGCCCCATCGAGAACAGTCTGAGCATTTCACCCCCATCCTCGTCAAGTAGGCGATTGAAACGAGCAGCACCTTACCGGCTACACCCCACACAAGTCGAGCAAAAGCATAGCAGCAGTCAAGCACTGCTGCGCCGTCGGCGTTTCATTAAGCAGCTCTGTCTCCGCCTCACTTGCAGAGTGCGTCTTCAGAGATGGTTTCTGTGTTGCACTAGACATGCACGAAAACGTGGATACCTATACATGGGAACAAGAAGCTTTTTGTGGAGTTTTACAAAGAAATTTTTCACATTTGGGCTCATTACTGTGACAGTGTCTGATCGGTATGTGACTGTTGTTCCAGTTCGTGGGGGCTCTATGTCTCCCACATTTAATCCTAAAACCAGTTCTGCAATGGGAAATGTTTCTGATGACTATGTCTTGGTTGAGAAATTTTGCCTTGGAAATTATAAGTTTTCCAATGGTGATGTGGTGGTCTTCCGCTCCCCGTTGAATCACAAGGAGACACACATAAAGAGAATAGTTGCATTACCTGGTGAGTGGTTTGGCTGTTTTCGTAACTATGATGTGCTGAAGGTTCCAGAAGGACACTGTTGGGTTGAGGGAGACAATGCAGCTTCTAGCATGGATTCAAACTCATTTGGTCCTGTTCCTTTGGGTCTTGTTCGAGGAAGAGTGACCCACATTGTATGGCCTCCTCAAAGAATAGGTGCAGTCAAGAAGACTCCACCAGAAGGATTATCTTCTTAA 807 0.4585 MAVNGMNLECGHRKSLFAPLSPIENSLSISPPSSSSRRLKRAAPYRLHPTQVEQKHSSSQALLRRRRFIKQLCLRLTCRVRLQRWFLCCTRHARKRGYLYMGTRSFLWSFTKKFFTFGLITVTVSDRYVTVVPVRGGSMSPTFNPKTSSAMGNVSDDYVLVEKFCLGNYKFSNGDVVVFRSPLNHKETHIKRIVALPGEWFGCFRNYDVLKVPEGHCWVEGDNAASSMDSNSFGPVPLGLVRGRVTHIVWPPQRIGAVKKTPPEGLSS 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2023 268 FunFam Mitochondrial inner membrane protease subunit 125 263 - -
Glsi07g2023 268 SUPERFAMILY LexA/Signal peptidase 129 258 IPR036286 -
Glsi07g2023 268 Gene3D Umud Fragment, subunit A 126 261 - -
Glsi07g2023 268 CDD S26_SPase_I 131 245 IPR019533 GO:0004252|GO:0006465
Glsi07g2023 268 Pfam Signal peptidase, peptidase S26 109 199 IPR019533 GO:0004252|GO:0006465
Glsi07g2023 268 Pfam Signal peptidase, peptidase S26 209 250 IPR019533 GO:0004252|GO:0006465
Glsi07g2023 268 PRINTS Bacterial leader peptidase 1 (S26A) family signature 212 231 IPR000223 GO:0006508|GO:0008236|GO:0016020
Glsi07g2023 268 PRINTS Bacterial leader peptidase 1 (S26A) family signature 189 201 IPR000223 GO:0006508|GO:0008236|GO:0016020
Glsi07g2023 268 PRINTS Bacterial leader peptidase 1 (S26A) family signature 127 143 IPR000223 GO:0006508|GO:0008236|GO:0016020
Glsi07g2023 268 PANTHER MITOCHONDRIAL INNER MEMBRANE PROTEASE SUBUNIT 2 101 264 IPR037730 GO:0006465|GO:0006627|GO:0008236|GO:0042720
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2023 Glsi-ChrGlsi07 64460644 64469035 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g2023 139 262 MADS-box Gene Family AT1G29960 40.000 1.43e-19 80.5