Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g2016 ATGGAAGCCCTCAAGAGCACGTGCTCTAAGGCCATCGTTGATAGGGTTGGATCTTCTTCGTCTCAGAGAGGTGCCACTGCTATTCATTTCTCTGAAAGACTCGAATTTTGCTTTACCCGAAATGATAAAGTCGGCAACTTTCGCTTCCTGCAAATGGTACACAACAAGGGTATTCACCCGGTTCATGCTGTTCCATCCAAATCCCAGGTGGACTCGGAAGCTGTAGAACCTCAAGATCAACAAACAAAGGAAACAAAACTTGTTCGCGTCAAATTCCAATTGCAGAAAGATTGCAAGTTCGGTGAACAATTTCTTATAGTAGGTGATGATCCTATAGTTGGTGCTTGGGACCCTTCAGAGGCGTTGCCAATGACCTGGTCAGAAGGGCATCTATGGTCTGTTGAGCTGGATATGCCTGCTGGAAGGCCAATCCAATTCAAGTTTATTTTGAAAGGAATAGAAGGAGATATTGTTTGGCAACCAGGCTCAGATCGAATTATCCATGCTTGGGAAACTACGAATAGACTAACTGTTTGTGAGGATTGGGAAAATGCTGAACTTCAGAAAATAATAGAGGAAGAACAACTTTCTGATTCAAATGAGGAACTCCAGATTGACTCAGAAATGCCAACTTTTTCTGAAGAGGAGATGGTATCTACTGCAGCCAAAGCATCGCCCATTGAAGACAGCCAAACTTATCCAGAGGAGAAACCACTTGCTGAACCAGACCTGCAACAAGTTATTGGTGATAGTACTTCTTCCTCGATGGAGAAGCCGAGGACAATTGTTGCCGAGAATATAGGTTCCTCAGGGGATTTGATGAAGAGAACAAGTCCCAGAAGAGCTAAAAATAATATGGCTCTTCAGAATGAGAAACACGTTGTTAGTCCCATAAAAGATACTATTATACACGATCTTGGACACGACGGAAAGGTTGCAGCAGTCAATAATCAGGGAAAGAGAGTTGTGGAGGGCAACATATTTGACTACAAAGGAGGTCCTGTTCTTGTACCTGGCTTGACGCCATCAGTTGTGCCAACTGGAGAAATAGCTCAAGGTGAAGTTGAAGAAAGGATGACCATAGAAACTTCAATTGGAGCATTTGAACTTGAGGATCAGAATATGCCAGAGTTTATTGAGGAGCAAGAATCTGATGATGAAACACCCCAAGAGACAAGTGCAACTCTCAATAATGAACCAGATGATGGAACACCCCATGAGACAGGTGCAGCACTCAATAATGAGCCAGATGATGGAACACCCCAAGAGACAGGTGCAACTCTCAATAATGAACCAGATGATGGAACACCCCAAGAGATAGGTGCAACACTCAATAATGAGCCAGATGATGGAACGCCCGAAGAGACAAGTGCAACACTCAATCATGAGCCAGATGATGGAACACCACAAGAGACAAGTGCAACACTCAATAATGAGCCAGATGATGGAACACCACCAGAGACAAGTGCAACAATCAATAATGAGCCAGAGCTACATCACAATGAATATGAAGAGAAGTCTCATTTCATCACAGCAATGGATAATGAGATGTCAGACTCTCATGAAGTTGATGGAAATGTCCTGCAAAATGACATCCACTGGGGCCGTGAGATACTGAAGAAGTTTCTAACAAACTTTGGTTTGGTTTGA 1650 0.4333 MEALKSTCSKAIVDRVGSSSSQRGATAIHFSERLEFCFTRNDKVGNFRFLQMVHNKGIHPVHAVPSKSQVDSEAVEPQDQQTKETKLVRVKFQLQKDCKFGEQFLIVGDDPIVGAWDPSEALPMTWSEGHLWSVELDMPAGRPIQFKFILKGIEGDIVWQPGSDRIIHAWETTNRLTVCEDWENAELQKIIEEEQLSDSNEELQIDSEMPTFSEEEMVSTAAKASPIEDSQTYPEEKPLAEPDLQQVIGDSTSSSMEKPRTIVAENIGSSGDLMKRTSPRRAKNNMALQNEKHVVSPIKDTIIHDLGHDGKVAAVNNQGKRVVEGNIFDYKGGPVLVPGLTPSVVPTGEIAQGEVEERMTIETSIGAFELEDQNMPEFIEEQESDDETPQETSATLNNEPDDGTPHETGAALNNEPDDGTPQETGATLNNEPDDGTPQEIGATLNNEPDDGTPEETSATLNHEPDDGTPQETSATLNNEPDDGTPPETSATINNEPELHHNEYEEKSHFITAMDNEMSDSHEVDGNVLQNDIHWGREILKKFLTNFGLV 549
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g2016 549 Gene3D Immunoglobulins 85 183 IPR013783 -
Glsi07g2016 549 SMART CBM_20_2 87 179 IPR002044 GO:2001070
Glsi07g2016 549 MobiDBLite consensus disorder prediction 380 493 - -
Glsi07g2016 549 MobiDBLite consensus disorder prediction 211 277 - -
Glsi07g2016 549 Pfam Starch binding domain 88 174 IPR002044 GO:2001070
Glsi07g2016 549 MobiDBLite consensus disorder prediction 246 260 - -
Glsi07g2016 549 MobiDBLite consensus disorder prediction 415 493 - -
Glsi07g2016 549 CDD CBM20 89 182 - -
Glsi07g2016 549 ProSiteProfiles CBM20 (carbohydrate binding type-20) domain profile. 82 184 IPR002044 GO:2001070
Glsi07g2016 549 PANTHER STARCH-BINDING DOMAIN-CONTAINING PROTEIN 1 67 231 - -
Glsi07g2016 549 SUPERFAMILY Starch-binding domain-like 86 181 IPR013784 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g2016 Glsi-ChrGlsi07 64392863 64396242 Wgd