Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1969 ATGCAATACGTGCCAGCTAGGATTGAAGAAATATCGTCGCTTCAATCGTTATCTGCTCTGTTGTGGCGTTCGGTGACACGTGCGAGGAAGTTGGACCCGTCCAAAACGTCGACGTTTGTCATTGTGGTGAACTGCCGGCACCGGGTTGAGCCGAAGATGGACCCTTATTACTTCGGTGCCACGATTCAGAGCATCCTAACCGTTGCTCAGATCGGCGAGATTCTGTCTCATGATCTGCGCTGGTGTGCGGACCTACTACACAAAAACGTTGTCGCACACGATGACACTATGGTGCGACGCCGCGTAGAGGATTGGGAGAAGGCTCCCAGCTTTTTCCCGATAGGGAACTTCGACGGTGCAACAATCGAGTTAGGTGGCTCTCCACGCTTCCCGGTGTACAATAGTGACTTCGGGTGGGGCCGACCTTTGGCAGTCAGAAACGGGAAGAATAACAAGTTTGATGGGATCTTAATGGCCTATCCTGGTAGGGAAGGAAATGGAAGCGTTGATTTGGAGGTCGCTCTGGCGCCGGAGACGATGGGCGGTCTCGAAAACGACATGGAGTTTATGCAGTTCGTAACGCCAATCGGGTGA 594 0.5286 MQYVPARIEEISSLQSLSALLWRSVTRARKLDPSKTSTFVIVVNCRHRVEPKMDPYYFGATIQSILTVAQIGEILSHDLRWCADLLHKNVVAHDDTMVRRRVEDWEKAPSFFPIGNFDGATIELGGSPRFPVYNSDFGWGRPLAVRNGKNNKFDGILMAYPGREGNGSVDLEVALAPETMGGLENDMEFMQFVTPIG 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1969 197 Gene3D - 5 186 IPR023213 -
Glsi07g1969 197 PANTHER FAMILY REGULATORY PROTEIN, PUTATIVE (AFU_ORTHOLOGUE AFUA_3G14730)-RELATED 9 191 - -
Glsi07g1969 197 Pfam Transferase family 11 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1969 Glsi-ChrGlsi07 63587801 63588394 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1969 12 185 Monolignol Biosynthesis Gene Families AT5G48930 28.652 1.48e-20 86.7