Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1962 ATGGATTCTTGGGTTAGAATCCTTCTTCTCATTGCTTGCATTCTTCCAGCTTTGGTTGAATGTAGAGTGAGGCACTACAAATTCAATGTGGTGATGAAGAATACCACCAGGTTATGTTCAAGTAAGCCCATTGTCACTATCAATGGTAAGTTCCCAGGACCCACTCTTTACGCCAGGGAAGATGATACAGTGCTGGTCAAGGTCGTCAACCATGTCAACCACAACGTTACCATCCACTGGCATGGTATCCGGCAACTGCGAACCGGTTGGGCCGATGGTCCTGCATATATCACACAGTGCCCAATCCAGCCAGGGCAGACCTATGTGTACAACTTCACAATTACAGGGCAGAGAGGCACACTTCTTTGGCACGCACATGTTAACTGGCTAAGGTCAACTGTCCATGGTGCCTTAGTTATCTTGCCGAAGCGTGGTGTGCCTTATCCCTTTCCAAAACCAGATGATGAATTGGTTGTGGTGCTAGGAGAATGGTGGAAATCCGATACTGAAGCTGTTATCAATGAAGCTCTCAAGTCAGGAATGGCACCAAATGTCTCAGATGCTCACACCATTAATGGCCTTCCAGGGACTGTGGCCAATTGTTCCACACAGGATGTTTTCAACCTGCCTGTAGAAAGTGGCAAGACCTACCTATTGAGGATCATCAACGCTGCACTCAATGAGGAGCTGTTCTTCAAAATTGCTGGCCACAAGCTCACCGTGGTAGAAGTTGACGCCATATACGTGAAGCCCTTCAAGATTGAGACAATAGTGATTGCTCCTGGCCAAACCACTAATGTCCTTTTAACTGCAGACCAAAAATCTGGAAAATACTTAGTAGCAGCTTCTCCTTTCATGGATGCTCCAGTAGCTGTGGACAATTTAACGGCCACAGCTACTGTGCATTACACAGGAACTCTAGCCACTACCCCTACAGTTCTCACCACCCCACCTCCTAAAAATGCTACCAAAATTGCGAACAATTTCATAGATTCTTTGAAAAGCCTTAATTCCAAAAAATACCCAGCAAAAGTCCCATTAAAAGTTGACCATTCCCTTTTTTTCACTGTTGGGTTGGGGACTAATCCATGCCCATCTTGCAAAGCTGCTAATGGAAGCAGAGTGGTCGCTGCTGTGAATAATGTCACTTTTGTTATGCCAAACACTGCCTTACTTCAGGCACACTATTTCAACATCAAGGGAGTTTTCACCACTGATTTTCCTGCTAACCCACCTCATGTGTTCAACTACTCAGGGGCTGGACCTAAGAATTTGCAGACCACAAATGGCACTAAGCTTTTTAGGCTGCCTTATAATGCTACGGTTCAGCTTGTGATGCAAGATACTGGGATTATTGCTCCTGAGAACCACCCAGTTCATCTTCATGGGTTCAATTTCTTTGTTGTTGGCAGAGGAATAGGGAATTACGATCCCAAAAAGGATCCCAAAAACTTTAACCTTGTTGATCCTGTTGAGAGGAACACAATGGGTGTGCCTTCTGGAGGGTGGACTGCTATTAGATTCAGAGCTGATAATCCAGGAGTTTGGTTCTTGCACTGCCATTTGGAAGTGCATACAACATGGGGACTAAAGATGGCATTTTTGGTAGACAATGGCAAAGGTCCTAACGAATCATTGATACCACCACCCCAGGATCTTCCGAAATGCTGA 1671 0.453 MDSWVRILLLIACILPALVECRVRHYKFNVVMKNTTRLCSSKPIVTINGKFPGPTLYAREDDTVLVKVVNHVNHNVTIHWHGIRQLRTGWADGPAYITQCPIQPGQTYVYNFTITGQRGTLLWHAHVNWLRSTVHGALVILPKRGVPYPFPKPDDELVVVLGEWWKSDTEAVINEALKSGMAPNVSDAHTINGLPGTVANCSTQDVFNLPVESGKTYLLRIINAALNEELFFKIAGHKLTVVEVDAIYVKPFKIETIVIAPGQTTNVLLTADQKSGKYLVAASPFMDAPVAVDNLTATATVHYTGTLATTPTVLTTPPPKNATKIANNFIDSLKSLNSKKYPAKVPLKVDHSLFFTVGLGTNPCPSCKAANGSRVVAAVNNVTFVMPNTALLQAHYFNIKGVFTTDFPANPPHVFNYSGAGPKNLQTTNGTKLFRLPYNATVQLVMQDTGIIAPENHPVHLHGFNFFVVGRGIGNYDPKKDPKNFNLVDPVERNTMGVPSGGWTAIRFRADNPGVWFLHCHLEVHTTWGLKMAFLVDNGKGPNESLIPPPQDLPKC 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1962 556 NCBIfam laccase 21 556 IPR017761 GO:0046274|GO:0048046|GO:0052716
Glsi07g1962 556 Gene3D - 365 556 IPR008972 -
Glsi07g1962 556 Gene3D - 17 142 IPR008972 -
Glsi07g1962 556 SUPERFAMILY Cupredoxins 346 556 IPR008972 -
Glsi07g1962 556 ProSitePatterns Multicopper oxidases signature 2. 519 530 IPR002355 GO:0005507
Glsi07g1962 556 ProSitePatterns Multicopper oxidases signature 1. 514 534 IPR033138 -
Glsi07g1962 556 CDD CuRO_3_LCC_plant 402 539 IPR034289 GO:0005507
Glsi07g1962 556 CDD CuRO_2_LCC_plant 158 303 IPR034285 -
Glsi07g1962 556 Gene3D - 153 339 IPR008972 -
Glsi07g1962 556 FunFam Laccase 12 142 - -
Glsi07g1962 556 CDD CuRO_1_LCC_plant 26 142 IPR034288 GO:0005507
Glsi07g1962 556 Pfam Multicopper oxidase 30 143 IPR011707 GO:0005507
Glsi07g1962 556 Pfam Multicopper oxidase 407 539 IPR011706 GO:0005507|GO:0016491
Glsi07g1962 556 SUPERFAMILY Cupredoxins 150 318 IPR008972 -
Glsi07g1962 556 Pfam Multicopper oxidase 156 305 IPR001117 -
Glsi07g1962 556 PANTHER MULTI-COPPER OXIDASE 30 544 IPR045087 -
Glsi07g1962 556 SUPERFAMILY Cupredoxins 16 167 IPR008972 -
Glsi07g1962 556 FunFam Laccase 154 339 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1962 Glsi-ChrGlsi07 63373500 63376896 Dispersed/Wgd