Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1957 ATGGAGGCAACAAAACCCAACTCCCTCATGCTTCTTCTCTGTCACCTCCTCTTGTTCTTCTTCAATCACAACCATATCTCAGCTTCTTCTACACCATCCGCTTCAAAATCAACCCCATTTTTCCCAAAAAAAGCCCTACCCACCAAATCTGGGTACCTCCCTGTTAACAGCACCTCCAATTCCGCCATTTTCTACGCATTCTATGAAGCCCAGAACTCCACTTCACCTCTCTCCCAAACCCCACTTCTCCTTTGGCTCCAAGGTGGCCCTGGTTGCTCCTCCATGATCGGCAACTTCTTCGAGCTTGGACCCTGGCGCGTCACCAAATCGCTAACCCTTGAGCCCAACCCGGGTGCTTGGAATAGAATTTTTGGCCTTCTTTTTCTTGATAATCCAATTGGAGCTGGATTCAGTGTGGCCTCAAAGCCTGAAGAAATTCCAAGAGATCAAATTTCTGTAGCCGAACACCTTTTCACTGCAATAACCAAGTTTATTCAACTTGACCCAGTTTTCAAGTATCGCCCAATTTACATAACTGGCGAAAGCTATGCTGGGAAGTATGTTCCAGCCATTGGGTATTATATACTGCAGGAAAATGCTCAGTTGCAGGTTTCTCAGAGAGTGAATTTGGAAGGTGTGGCAATTGGGGATGGGATGACAGACCCTGTGACCCAGGTGGCGACTCATGCTTTGAATGCTTACTTTGTTGGATTGATCAACGAGAGGCAGAAGAAGGAGGTGGAGAAGGTTCAGTTTGAAGCAATCAGATTGACCCAGAAGGGAAAGTGGAGTGAAGCAACAGATGCCAGAAGCCGAGCCATGAAATTGTTGCAGAACATGACTGGGTTGGCTACTTTGTATGACTATACAAAGAAAGCTCCTTACCAAGATGATTTAGTCACTGAGTTCTTAAAATCTTCTGAGGTGAAGAAAGCGTTGGGGGTGAATGAATCACTTGTGTTTGAAGCATGCAGCGATGTTGTAAGGGTTGCGTTGAATGAGGATATGATGAAGAGTGTGAAATATATGGTGGAGTACTTGGTGAGGAAGAGCAAGGTGCTGTTATACCAAGGCCGGTATGACTTGAAGTTTGGGCCGCTTCAAGTTGAGGCTTGGGTGAAGACAATGAAATGGGAAGAGATTGTGAAGTACATGAATGCAGAAAGAAAGATTTGGAAAGTGAATAATGAGCTTGCTGGGTATGTACAAAAGTGGGGGAGCCTCACCAATGTTTTGGTTTTGGGGGCTGGACATCTTTTGCCAGCTGACCGGGGTGTCAATTCTCAAGCAATGATAGAAGACTGGATTTTGGAAAAGGGCTTATTTAGCAATGTGCAGGAGCCATCAAAACCTTGGGATTCAGAGTGA 1368 0.4554 MEATKPNSLMLLLCHLLLFFFNHNHISASSTPSASKSTPFFPKKALPTKSGYLPVNSTSNSAIFYAFYEAQNSTSPLSQTPLLLWLQGGPGCSSMIGNFFELGPWRVTKSLTLEPNPGAWNRIFGLLFLDNPIGAGFSVASKPEEIPRDQISVAEHLFTAITKFIQLDPVFKYRPIYITGESYAGKYVPAIGYYILQENAQLQVSQRVNLEGVAIGDGMTDPVTQVATHALNAYFVGLINERQKKEVEKVQFEAIRLTQKGKWSEATDARSRAMKLLQNMTGLATLYDYTKKAPYQDDLVTEFLKSSEVKKALGVNESLVFEACSDVVRVALNEDMMKSVKYMVEYLVRKSKVLLYQGRYDLKFGPLQVEAWVKTMKWEEIVKYMNAERKIWKVNNELAGYVQKWGSLTNVLVLGAGHLLPADRGVNSQAMIEDWILEKGLFSNVQEPSKPWDSE 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1957 455 SUPERFAMILY alpha/beta-Hydrolases 46 437 IPR029058 -
Glsi07g1957 455 ProSitePatterns Serine carboxypeptidases, serine active site. 178 185 IPR018202 GO:0004185
Glsi07g1957 455 Coils Coil 240 260 - -
Glsi07g1957 455 Gene3D alpha/beta hydrolase 24 446 IPR029058 -
Glsi07g1957 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 116 128 IPR001563 GO:0004185|GO:0006508
Glsi07g1957 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 408 421 IPR001563 GO:0004185|GO:0006508
Glsi07g1957 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 164 189 IPR001563 GO:0004185|GO:0006508
Glsi07g1957 455 PRINTS Carboxypeptidase C serine protease (S10) family signature 129 139 IPR001563 GO:0004185|GO:0006508
Glsi07g1957 455 FunFam Carboxypeptidase 32 443 - -
Glsi07g1957 455 Pfam Serine carboxypeptidase 46 436 IPR001563 GO:0004185|GO:0006508
Glsi07g1957 455 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 43 423 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1957 Glsi-ChrGlsi07 63296518 63297885 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1957 308 436 Calmodulin-binding Proteins AT2G22960 23.308 5.24e-08 51.2