Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1940 ATGATTTCTATTGCTGAGGAAATAGAGGAGGAAGATACGACGTCGTATTTTGGTGCCGCGGCCGCCGAGTTGCCCACCCTCGAGCAACTCTTCAAAATCGAAGACGCAGAGGAAGAAGCAGCGAGGGACGGCAGCGACAGGCCGGTGCACCACGTGCTTGACATCACGGATGGCAATCACGAGCCTCGGTCGCTGCCTTTCGTGCTCAAGTTCAGGAATCTCACGTACAGCGTGAAAGTTCGGCAGAAGATGAACTTCTCAACGTTGTTTTCGGGTCGGGGGAAGCGTTTAGGAGCAGCGACCAGCACCAAGACTCTACTGAATGATATCTCCGGCGAGGCTCGCGACGGCGAGATACTTGCCATTATGGGTGCTAGTGGTTCGGGGAAATCCACTCTGATTGATGCGTTGGCCAACAGAATAGCGAAGGAAAGCTTGAAAGGAAGCCTGACATTGAACGGGGAGGCCTTAGAGTCGCGGCTTCTGAAGGTGATTTCGGCCTATGTGATGCAGGACGATCTTCTCTTTCCAATGCTCACAGTAGAAGAGACTCTTATGTTCGCAGCTGAATTCCGATTGCCTCGTTCGCTCTCGAAATGCAAAAAGAAGATGCGAGTACAAGCTCTGATAGACCAGCTCGGCCTCCAAAATGCCGCGAAAACTATTATCGGTGATGAAGGCCACCGCGGGGTCTCCGGTGGCGAACGACGCCGTGTCTCCATAGGCGTTGACATAATCCATGACCCCATCATCTTGCTCCTCGACGAACCCACATCGGGACTCGATTCCACTAGCGCATTCATGGTGGTGAAAGTTTTGCAGAGAATCGCCAACGGCGGAAGCATCGTGATCATGTCCATACACCAACCCAGTGACCGAATCTTCGGCCTACTCGACAGAATGATATTGTTATCTCGCGGACAACCAGTATTCAGCGGTTCACCCAGTCAGCTTCCTCTCTTCTTCGCTGAATTTGGGCACCCAATACCGGAAGATGAGAACCGAACCGAGTTTGCATTGGACCTGATTAACGAGATCGAAGGCTCATCTGGAGGAACTAATTGCTTGGTGGAGTTCAACAAATCCTGGCAGAGCAGCAGAAACGTTGAGGCCGATCACCATGGAATATCTTTGAAAGAGGCGATTAGTGCAAGCATTTCGAGGGGCAAACTAGTGTTGGGTGCCAAAAAAACAAACGCAAGCCCAGCTTCAATGGTGCCAACATTTGCCAACCCATTTTGGATTGAGATGGTAAAGCTCTCGCAACGATCCTTTACCAATTCACGTAGAATGCCTGAGCTATTTGGTATTCGATTGGCTGCGGTTTTGGTAACCGGGTTTATTCTTGCCACTATATTTTGGCAATTGGATAACTCTCCCAAAGGGGCGCAAGAAAGGCTTGGCTTCTTCGCATTCGCCATGTCCACCACCTTCTACACAACCGCCCAAACACTACCTGTTTTTCTCCAAGAGCGATACATTTTCATGAGAGAAACTGCTTACAATACTTACCGGCGATCGTCCTATCTTGTCTCTAATGCTCTTGCAATGTTACCTTCGTTGCTTATCCTCTCATTGGCTTTCGCAGTGACCACGTTTTGGGCAGTGGGACTTGACGGAGGATTATTTGGGTTCTTGTTCTATTTCCTCATCATATTTGCTTCATTCTGGGCCGGGAACTCCTTCGTCACCTTCCTCTCCGGGGTGGTACCTCATGTGATGTTGGGCTACACGATAGTGGTAGCGGTCTTGGCATATTTCTTGCTCTTCAGTGGGTTCTTCATTAACAGAGATAGAATCCCAAGTTACTGGATTTGGTTCCACTATTTGTCGTTGGTGAAATACCCATTTGAAGCTGTTCTGCAGAACGAGTTCAATGACTCAGTGAAGTGCTACATGAGAGGGGTGCAAATTTTCGATAACACGCCGCTTGAGGGGGTGCCAATGTTCATGAAAATGAAGCTGTTGGAGAGCTTGGGCAACACATTGGGGACGAAAATCACGAGCTCAACATGCTTTATTACAGGTGCAGATATATTACAGCAGAATGGGGTAAAGGAGTTAAGCAAGTGGAACTGTTTGTGGGTAACGGTGGGTTGGGGTTTCTGGTATAGGACTCTGTTTTACTTCGCCCTGTTGCTGGGCAGCAGGAACAAGAGGAGGTAA 2166 0.4926 MISIAEEIEEEDTTSYFGAAAAELPTLEQLFKIEDAEEEAARDGSDRPVHHVLDITDGNHEPRSLPFVLKFRNLTYSVKVRQKMNFSTLFSGRGKRLGAATSTKTLLNDISGEARDGEILAIMGASGSGKSTLIDALANRIAKESLKGSLTLNGEALESRLLKVISAYVMQDDLLFPMLTVEETLMFAAEFRLPRSLSKCKKKMRVQALIDQLGLQNAAKTIIGDEGHRGVSGGERRRVSIGVDIIHDPIILLLDEPTSGLDSTSAFMVVKVLQRIANGGSIVIMSIHQPSDRIFGLLDRMILLSRGQPVFSGSPSQLPLFFAEFGHPIPEDENRTEFALDLINEIEGSSGGTNCLVEFNKSWQSSRNVEADHHGISLKEAISASISRGKLVLGAKKTNASPASMVPTFANPFWIEMVKLSQRSFTNSRRMPELFGIRLAAVLVTGFILATIFWQLDNSPKGAQERLGFFAFAMSTTFYTTAQTLPVFLQERYIFMRETAYNTYRRSSYLVSNALAMLPSLLILSLAFAVTTFWAVGLDGGLFGFLFYFLIIFASFWAGNSFVTFLSGVVPHVMLGYTIVVAVLAYFLLFSGFFINRDRIPSYWIWFHYLSLVKYPFEAVLQNEFNDSVKCYMRGVQIFDNTPLEGVPMFMKMKLLESLGNTLGTKITSSTCFITGADILQQNGVKELSKWNCLWVTVGWGFWYRTLFYFALLLGSRNKRR 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1940 721 Pfam ABC-2 type transporter 288 417 IPR043926 GO:0140359
Glsi07g1940 721 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 69 331 IPR003439 GO:0005524
Glsi07g1940 721 ProSitePatterns ABC transporters family signature. 231 245 IPR017871 GO:0005524|GO:0016887
Glsi07g1940 721 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 51 708 - -
Glsi07g1940 721 Gene3D - 94 320 IPR027417 -
Glsi07g1940 721 Pfam ABC-2 type transporter 420 625 IPR013525 GO:0016020|GO:0140359
Glsi07g1940 721 Pfam ABC transporter 107 259 IPR003439 GO:0005524
Glsi07g1940 721 CDD ABCG_EPDR 68 313 - -
Glsi07g1940 721 FunFam ABC transporter G family member 6 96 322 - -
Glsi07g1940 721 SMART AAA_5 116 308 IPR003593 GO:0016887
Glsi07g1940 721 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 100 318 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1940 Glsi-ChrGlsi07 62871357 62873522 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1940 106 286 Calmodulin-binding Proteins AT2G36910 29.348 2.78e-12 68.6