Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1881 ATGATGAGACCCATCGATGGGATAGAGCTATTTGGACAGCATTTTTCGACAAAGCAGAGATCTCCAAAAGGGGTTGGTTTGAATCTTCGAAAGATCCAATTTCTTGAGTTGGGGAAGTTTTTACCATTGGATTTCGAATTGGGTAGTCGGAGCCGGTTCCGGATTCGGATTTCTCTTCTTAGTTTGTCTTTGATGGCTCAGGCAACGGGGCGGAGCAGAATGCTCGGAGATTACATCGTCGACCGGCAAATTGGTTTCGGGTCGTTCTCGGTGGTCTGGCTAGCTAGGCACCGGGTCCATGGAACCGAGGTGGCGATAAAGGAGATCACCACGGTTCGGCTCGACAAGAAGTTGCGGGAGAATCTGATGTCTGAAGTTTTTATCTTGAAGCGAATAAACCATCCTAATATCATCTGTTTGCACGATATCATTGAGGTTCCTGGGAAGATACATCTTGTGTTGGAGCACTGTAAAGGGGGTGATCTCTCTTTGTTTATTCAACGCCATGGAAAAGTCCCAGAGGCAACTGCAAAGCGCTTTATGCAGCAGCTAGCGTCTGGCCTTCAAATTCTTCGGGACAATAACCTTGTTCATCGAGATTTGAAACCACAGAATCTTCTTCTCTCTAGAAATGATGACCAGTCAGTGCTGAAGATTGCGGATTTTGGATTTGCAAGGTCTCTGGAACCTTGCGACCTTGCAGAGACCTTATGTGGCTCGCCACTCTACATGGCTCCGGAAATCATGCAACTACAGAAGTATGATGCTAAGGCAGATCTCTGGAGTGTTGGAACAATCTTATTTCAGCTAGTTATGGGGAGAACACCTTTTACAGGAAACAATCAGATACAGTTATTAAAGAACATTCTGAAATCAACTGAATTGGAGTTCCAATCTGATAACCAAAATCTGAGTTTGAGTTCTGACTGCAAAGATCTATGCCAGAAATTGCTGTGTCGTGATCCAGTGGAGCGGCTAAGTTTTGAAGAATTCTTTAACCACCCATTCCTTTCTCAAAAGCAACCAGAACAGGACAAGTCATTGAGGAATAGAAGTTCTTCAAGGCTGCTGGGTGGATTTCATTCAACAGAGTCTGATCCTTTGAGAAGGACCGAGGAAAATTATCAAGAGGATTGCTTGCCTTTCTTTCTAGATGATGATTCTAGTGGTCCCAAGGGGAGCCTATCCTTTCCAAGGAAGAAGTTCTCGATGAAGTCTACCTATGGATTTGATCTAAATAACAAACTAGATAAAGCAGACTTGGCATCCACTGCTTCTAATTTTACTTCCAAATATGGTAGTATGACACATCAACATGAAAACACTACAATAAGGTTGGACAGCTATAAAATCTCACATGAAAATCTCACTGATCCTCTAGAATCTCTAGAACAGAGATTGGAAAACACTCATTCCAAAGATTCTCTAGAGAATATTGATCAAGATTATGTTCTTGTGTCTGAACCCTCTTTGGATGTTCCGTCTTCGTCAGTGAGTTCTTCAAAGCCAAGCCATTTTCCATATAGGTCAGGTAGTCTTCCCAAAGAGTCTTCTAATAGATTCACTAGATTAAGTACTATAATGCCAATCACTGGTGTAGCTTCCACCAGCACTTATCAAATTGGAAGTTTGGAAAGTCAGGACTCTCCTCCAGGTATGTCACCTGGATCAATGGATACAGGAGATGAGCAGCCATCAGCTGACAGCATGATAAGGATAAAATCATTGCAATGGTGTGCATCTGCCATCAAGGAATTAGCTAATGAAAAGATGGAGGCAGGAAAGTGGCTAGAGGCATTCTCTATCGAGCTTGTAATTCTTGCAATTTGGAAGCAGGCACTGCACATATGCCATACACAAGCTGCCTCAGCCATGGACGGAAGTCCAAATCCAGAAAATACAAGATCTAGGAGGAGCACCAAGAAGCATGGTTCTCCTGATTCAGAAGAATGCCTTGATGGAAACACCAAAGGACCAAGGGATATTTTATCTCAAATTGAAAGTGAATTTCTGAGGGAATTTGAGCATGCTGAAGAACTTGCTAAGGCTGTTGAACCTGGAAATATAGAGATGCCAGATGCAATGGAGACAATATTTCAATCTGCCCTTGCTTTTGGGAGACATGGGGGTGTAGAGGAGCTCATGGGTGAAATGGAAAGTGCAACTTCATTGTATTCAAAAGCTGTGCGTCTGTTAGTCTTCCTTCTAACGGAAGCACCATCCCTTATTCTTAACCCTCCATTTTCACTGACAACTTCACACCAATACAGACTTCAGAATTACATTGATATTCTTAACAATAGGCAAGGGAGTAAAATTGGGAATGCTGATGACCAGCACAGTGTGATGTTGTACAGTTCAATACTGGAATGA 2373 0.4273 MMRPIDGIELFGQHFSTKQRSPKGVGLNLRKIQFLELGKFLPLDFELGSRSRFRIRISLLSLSLMAQATGRSRMLGDYIVDRQIGFGSFSVVWLARHRVHGTEVAIKEITTVRLDKKLRENLMSEVFILKRINHPNIICLHDIIEVPGKIHLVLEHCKGGDLSLFIQRHGKVPEATAKRFMQQLASGLQILRDNNLVHRDLKPQNLLLSRNDDQSVLKIADFGFARSLEPCDLAETLCGSPLYMAPEIMQLQKYDAKADLWSVGTILFQLVMGRTPFTGNNQIQLLKNILKSTELEFQSDNQNLSLSSDCKDLCQKLLCRDPVERLSFEEFFNHPFLSQKQPEQDKSLRNRSSSRLLGGFHSTESDPLRRTEENYQEDCLPFFLDDDSSGPKGSLSFPRKKFSMKSTYGFDLNNKLDKADLASTASNFTSKYGSMTHQHENTTIRLDSYKISHENLTDPLESLEQRLENTHSKDSLENIDQDYVLVSEPSLDVPSSSVSSSKPSHFPYRSGSLPKESSNRFTRLSTIMPITGVASTSTYQIGSLESQDSPPGMSPGSMDTGDEQPSADSMIRIKSLQWCASAIKELANEKMEAGKWLEAFSIELVILAIWKQALHICHTQAASAMDGSPNPENTRSRRSTKKHGSPDSEECLDGNTKGPRDILSQIESEFLREFEHAEELAKAVEPGNIEMPDAMETIFQSALAFGRHGGVEELMGEMESATSLYSKAVRLLVFLLTEAPSLILNPPFSLTTSHQYRLQNYIDILNNRQGSKIGNADDQHSVMLYSSILE 790
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1881 790 CDD STKc_ATG1_ULK_like 84 336 - -
Glsi07g1881 790 Pfam Protein kinase domain 78 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1881 790 PANTHER SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED 65 702 IPR045269 GO:0004674|GO:0006914
Glsi07g1881 790 ProSiteProfiles Protein kinase domain profile. 78 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1881 790 FunFam Aurora kinase A 70 160 - -
Glsi07g1881 790 FunFam Serine/threonine-protein kinase ATG1 70 378 - -
Glsi07g1881 790 MobiDBLite consensus disorder prediction 542 564 - -
Glsi07g1881 790 ProSitePatterns Serine/Threonine protein kinases active-site signature. 196 208 IPR008271 GO:0004672|GO:0006468
Glsi07g1881 790 SUPERFAMILY Protein kinase-like (PK-like) 74 531 IPR011009 -
Glsi07g1881 790 SMART serkin_6 78 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1881 790 Gene3D Transferase(Phosphotransferase) domain 1 69 378 - -
Glsi07g1881 790 MobiDBLite consensus disorder prediction 542 565 - -
Glsi07g1881 790 MobiDBLite consensus disorder prediction 342 371 - -
Glsi07g1881 790 MobiDBLite consensus disorder prediction 623 660 - -
Glsi07g1881 790 MobiDBLite consensus disorder prediction 635 656 - -
Glsi07g1881 790 MobiDBLite consensus disorder prediction 491 517 - -
Glsi07g1881 790 ProSitePatterns Protein kinases ATP-binding region signature. 84 107 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1881 Glsi-ChrGlsi07 61686402 61696209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1881 74 346 CBL-interacting serine-threonine protein kinases AT2G30360 35.484 6.48e-48 174
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK Group-Pl-3 Glsi07g1881 Pkinase 1.2e-70 CL0016