Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1864 ATGGTTTTTTCCCACCGAAGGAAGCGCAATCAGAGAGAAACCCAACTAAGCATAAGCAGGGCACGTGACATATTGAATGCAGATAATAACAGTGGCAGATCAGCCAAGATCTTCATCATCAAAGAGATCACAAAGGCCACCAACAACTTCACCAAGCACAGCCTCCTTGGCTCCGGCGGCTTCGGCGAGGTCTTCAAGGGCACTCTCGACGACGGAACCCTAACCGCGATCAAGCGAGCCAAGGTCGGCAACACCAGAGCAATCGATCAGATCCTTAACGAGGTCCGAATCCTCTGTCAAGTTAACCATAGGAGCCTCGTACGACTCTTGGGATGCTGCGTCGAGCTTCATGACGAACCTCTTCTTATCTACGAGTATGTCCCCAATGGGACCCTCTTTGATCACCTCCACAACATCAGCTCCGGCGAGTGGGTCCCTCTCCCATGGCATCGCCGGCTAAAAATCGCACATCAGACCTCCGAAGGGCTTGCTTATCTTCACACTTCGGCTATACCCAGAATTTATCACAGAGACATCAAGGCTAGTAACATTCTCTTGGACGAGAATTTTAATGCTAAGCTGACAGATAAAAGTAATGTTTATAGTTTTGGGGTTGTTTTGCTGGAGCTGTTGACTTCGAAGAAAGCCCTTGATTTTAGCAGAAAAGAGGAAGATGTGAACTTGGTGGTTTTTGTCAAGAGGGTTTTGAAGAATGGGAGGTTAATGGATGCCATTGATCCTATGCTGAAAAAGGGAACTAGCAAGTTGGAGTTGGAGAGTATGATGGCGTTGGGGCCTCTTGCAGCTGCCTGCTTGGATGATCACAGGCAAAATAGGCCTTCAATGAAAGCTGTTGCTGATGAGATTGAATATATTCTTGATATTGTTAATGACGGGAAGGGTGAGGTTTCAGAGGTTTGA 921 0.4734 MVFSHRRKRNQRETQLSISRARDILNADNNSGRSAKIFIIKEITKATNNFTKHSLLGSGGFGEVFKGTLDDGTLTAIKRAKVGNTRAIDQILNEVRILCQVNHRSLVRLLGCCVELHDEPLLIYEYVPNGTLFDHLHNISSGEWVPLPWHRRLKIAHQTSEGLAYLHTSAIPRIYHRDIKASNILLDENFNAKLTDKSNVYSFGVVLLELLTSKKALDFSRKEEDVNLVVFVKRVLKNGRLMDAIDPMLKKGTSKLELESMMALGPLAAACLDDHRQNRPSMKAVADEIEYILDIVNDGKGEVSEV 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1864 306 ProSitePatterns Protein kinases ATP-binding region signature. 56 78 IPR017441 GO:0005524
Glsi07g1864 306 SMART serkin_6 50 292 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1864 306 ProSiteProfiles Protein kinase domain profile. 50 306 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1864 306 ProSitePatterns Serine/Threonine protein kinases active-site signature. 174 186 IPR008271 GO:0004672|GO:0006468
Glsi07g1864 306 Pfam Protein kinase domain 50 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1864 306 SUPERFAMILY Protein kinase-like (PK-like) 33 293 IPR011009 -
Glsi07g1864 306 Gene3D Phosphorylase Kinase; domain 1 22 126 - -
Glsi07g1864 306 PANTHER WALL-ASSOCIATED RECEPTOR KINASE-LIKE 21 193 292 IPR045274 GO:0007166
Glsi07g1864 306 Gene3D Transferase(Phosphotransferase) domain 1 127 196 - -
Glsi07g1864 306 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 22 126 - -
Glsi07g1864 306 Gene3D Transferase(Phosphotransferase) domain 1 197 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1864 Glsi-ChrGlsi07 61424074 61425105 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1864 5 306 Receptor kinase-like Gene Family AT5G02070 54.070 2.92e-128 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Glsi07g1864 Pkinase 1.2e-27 CL0016