Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1860 ATGGAAGCCACATCTATAACACAGTTGTTGAAGAGCCTTTGTGATTATACACATTGGAAGTATGCTGTGTTTTGGAAGCTTAATCATTATTGTCCAATGACTTTGACCTGGGAAGATGGATACTATGGTTCCCAGAAAACAAATGAGGCTGTGGAAAGTATGTGTGGTGATATTAATCTTGAAGCCTCAGATGAGGTATTTTCTTCAAGTATTGAAAGTAATGGTGGTTTTGGAGATTATTCAGTTCAACTACTCATGACTGAAATGCCTAATCTGAAGTACATTTTAGGAGAGGGGATTATCGGAAAAATAGCTCTTACAGGGGATCATTGTTGGGTTTTCTGCAAGGATATCATTACAAGTAATTTAAACACTGATCTAATCTCTGAGGGTCCTTATGAGTGTCTTCTTCAATTTGCATCAGGGATAAAGACTATTGTGCTTGTATCAGTTCGTCCATATGGAGTTTTGCAATTTGGTTCATTTGAAGCGGTTGAAGAAGACCTGGCATTTGTTGCCAATGTCAAGGAGAAGTTCAATTCTATTTATTGTAAGGCAGCAAATACTACAATTTTGAGTGCGAATATTGATATTCAAGCTTCTTCGCTCTCAGCCCTAACAGATTGTCTTATTGATAGCTTGGATGAATCATCTATTGCAAATAATACAAATGGATCAATATGGTTAAATCCAACAGTGCCATCATTTCTTCAGGATGAGTATTACTTGTTTAGGGAAGATCAGCCAGAATCTCTTATAAAAGCAAACAAAAATGAGATAATTTCCCAATCCCTTGGGGTTTCAAATGATCCAAGTCACGTTGGTGTGGTTGACATGAAATTAAACCAAATGGAAGAGAAGAGATGGGCCTGTTCTCGGTGGGTCAACAATGTCGGAGTATTTGGAGATATATTAAATGGAACATGCTCTCACTCCGGTAAAGATATGACAGAACAACAATTTGGAGGCACCGACACTGATCATAAAAGTTGTCAGGATGTGGATAGTTTATTCCATTTTTCATCTGATTGTGAATTATACAGAGCACTTGGACCTGGTGCTGGGGGACAGACTTCTGAATCTCTATCAAAATATTTATCTGTCGAGGATACATACAGTAGCTCAGCTTTGATCTCCAATAAAAACAAGAAAGATCATATTGAGGATTTATGGCTTCCCAAGGAAGGTAATGCAGAATATCTTTTGGATGCTGTTGTTGGCAATGCTTCAGCTGAAACTACATTAAGTATATCCAACATTATGCCTGCTATAACCTTGCCAAGAGAGGATACTGCTTCCATTCTAGCACAAATTCCTTCTGAAAAAAGCACTTTGATATTGGATTATTCAGATCCTAAAAGCTATCTTACACCTGCATTTGTGGCTGAGGGCGGAGATGAGTATAGTGACCTTATTACGTCAGCTTCTTTTGATGGCAATTCAAGCATATTGATTGATGAGACACAGCAGGAGAAGATTTATGGTCATATGCACCCTAAAAGTGGACCCAAAATTTCTAGAACCAGCAAGAAAAGAGCCAGAGTTGGTAATACCCCAAGGCCAAGACCAAGGGATAGACAGTTGATCATGGACAGGATGAAGGAGCTGAGGGAACTTGTCCCTGATGGTGCCGGGTGTGGCATTGAAAGCCTCTTAGACCAAACCATAAAGCACATGCTTTACTTGAGAAATATGACAACACAAGCTGAGAAATTGAAACAATGTCTGCTTCAGGAGGTGCCTGAATGTAAGAAGAAAATTGCTGGCAGCAATGCAGGAAGGAGTTTTGCCTTTGACCTAGAAAGTGAACTCCAAGTATGCCCCATAATCATAGAAGATCTTGGATGCTCAGGGAATATGCTCATAGGGATGATATGCAGTGAGCAAGGACTATTCTTGGAGATAGCCAACGTGATCCGGCGGATGGAGCTTACCATCTTGAAAGGTGTTTTAGAGAACTGTTCAAGCACCACTTGGGCTTGTTTCATTGTTGAGGTTCCCATTGGTTTTCGCAGAATGGATATTCTGTGCCCTTTGTTGCATCTTTTGCAGCTCAGAAAAAACCCTGTCCAAAATAGAATTTGA 2085 0.3971 MEATSITQLLKSLCDYTHWKYAVFWKLNHYCPMTLTWEDGYYGSQKTNEAVESMCGDINLEASDEVFSSSIESNGGFGDYSVQLLMTEMPNLKYILGEGIIGKIALTGDHCWVFCKDIITSNLNTDLISEGPYECLLQFASGIKTIVLVSVRPYGVLQFGSFEAVEEDLAFVANVKEKFNSIYCKAANTTILSANIDIQASSLSALTDCLIDSLDESSIANNTNGSIWLNPTVPSFLQDEYYLFREDQPESLIKANKNEIISQSLGVSNDPSHVGVVDMKLNQMEEKRWACSRWVNNVGVFGDILNGTCSHSGKDMTEQQFGGTDTDHKSCQDVDSLFHFSSDCELYRALGPGAGGQTSESLSKYLSVEDTYSSSALISNKNKKDHIEDLWLPKEGNAEYLLDAVVGNASAETTLSISNIMPAITLPREDTASILAQIPSEKSTLILDYSDPKSYLTPAFVAEGGDEYSDLITSASFDGNSSILIDETQQEKIYGHMHPKSGPKISRTSKKRARVGNTPRPRPRDRQLIMDRMKELRELVPDGAGCGIESLLDQTIKHMLYLRNMTTQAEKLKQCLLQEVPECKKKIAGSNAGRSFAFDLESELQVCPIIIEDLGCSGNMLIGMICSEQGLFLEIANVIRRMELTILKGVLENCSSTTWACFIVEVPIGFRRMDILCPLLHLLQLRKNPVQNRI 694
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1860 694 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 309 689 IPR043561 GO:0003700|GO:0006355
Glsi07g1860 694 MobiDBLite consensus disorder prediction 503 517 - -
Glsi07g1860 694 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 8 179 IPR025610 -
Glsi07g1860 694 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 513 562 IPR011598 GO:0046983
Glsi07g1860 694 MobiDBLite consensus disorder prediction 495 524 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1860 Glsi-ChrGlsi07 61354258 61359218 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1860 505 688 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 45.320 1.04e-44 169