Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1854 ATGCATTTGAATCCCACCAACCTTTTCAAATCTCAAGTCCCTATTATTCAAAACATGCCCAACCTTCTCAAACTCTCTTCAGTTTTACTGCTCGTTTTGATCCCAATTTCTTCTCAGCTTGACGAGGTTTTTTATGCTGGATTTAAGGATGTGGGTGGCAACATAACCTTGAATGGAATAGCAGAAATCCAGAATAATGGAATACTGAAATTGACGAACGAGACCAGTAGATTAATGGGTCATGCCTTCTATCCATCTCCTTTTCAGTTCAAGAACTCCAGCAGTGGTGAAGCTTTCTCCTTTTCTACCTCATTTGCACTAGCTATAGTCCCTGAGTATCCCAAGCTTGGTGGCCATGGCATGGCTTTTACAATAGCAACTTCTAAGGATCTCAAAGCTCTGCCCAGTCAGTATCTTGGTCTCCTTAATTCAAGTGATGTTGGGAATTTCTCAAATCATCTCTTTGCTGTTGAGTTCGACACCGTCCAAGATTTTGAATTTAGTGACAAGAACGACAACCACGTTGGAATCGACATCAACAGCATGGTCTCCAATGCATCGGAGACTGCAGGTTATTACACCGACGATTCAGGTTCGACCAAACAAGATCTCAACCTCAAAAGTGGGAAAGCGATTCTAGTATGGGTTGATTACGATTCAGCTGCAAATCTCATCAGTGTCACCCTTTCTCCTTCTTCTTCGAAACCCAAAAAGCCAATCTTGTCATTCGCTGTAGATCTCTCTCCCATTCTTGAAGAATCTATGTATGTTGGTTTCTCTGCATCAACGGGTCTGCTGGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAAATCAATGGAGCAGCTCAAGCCCTTGATCTCTCTTCTCTCCCACAACTTCCAGCACCGAAGAAGAAGCACACATCTCTAATTACAGGGATTTCAGTCTCAGTGGTCGTGATTGTGTTATCTGCGATCTTAATAAGCGTTTACCTTTTCAGAAAAATCAAGAACGCCGATGTGATAGAATCGTGGGAGTTAGAAATTGGGCCGCACAGGTACTCCTACAAGGAACTTAAGAAAGCAACCAGAGGTTTCAAGGACAAAGAGCTCCTCGGCCAAGGTGGGTTTGGTCGAGTTTACCGAGGAACATTGCCAAATTCGAAAACACCGGTTGCTGTTAAGCGAGTTTCACATGAATCAAAACAGGGTCTCCGGGAATTCGTGTCGGAAATCGCCAGCATTGGCCGTCTCCGCCACCGGAACCTGGTTCAGCTTCTGGGTTGGTGTCGCCGGCGAGGTGACCTCCTCCTTGTGTACGATTTCATGGCCAATGGGAGCTTAGACAAGTACCTGTTTGACGAGCCAGAAACCATCCTAAGCTGGGAACAGAGGTTCAAGATCATAAAGGACGTTGCTTCAGCTCTTCTGTATCTACACGAAGGTTATGAACAGGTGGTGCTTCACAGGGACGTGAAGGCAAGCAATGTGCTTTTAGACTACGAACTCAATGGAAGACTAGGCGATTTTGGTCTTGCAAGATTGTACGAACATGGTGCTAACCCAAGCACTACGAGAGTGGTGGGTACCTTAGGCTACTTGGCCCCAGAGTTGCCCAGAACAGGCAGGGCCACCACAGGCTCCGATGTGTTTGCATTTGGTGCACTTTTGATGGAGGTTGCATGTGGTCGCAGGCCCATTGAGCCTAAGGCTCTTCCAGAAGAGTTGGTTCTGGTAGATTGGGTGTGGGAGAGGTACAAAGAAGGGAGAATACTAGATGCGGTGGACCCAAAACTAAATGGGAAATTTGATGAGAAAGAGTTGGTGATGGTGGTAAAATTGGGGTTGATTTGTTCAAACGATGCGCCTAGTGCTAGGCCTAGTATGAGACAATTGGTGAGGTATTTGGAAGGAGAAGTTGAGTTGCCAGAGGATTTGAGAAAACCAGGAGAGGGAGGTGGTCACGCGGAAGGGTTTGATGAGTTCTTGCACTCACTTGCATCTTCTTCATTTGATAAGATGAGCTCTAGCTCTTATACTGGACATAGAGAAATGGATGCTAGTTTTCCTTCTTTTGCTAATTCTCCTCTTTCCCTTCTCCATGGCAAAGGGGAAACTATGTGA 2106 0.4568 MHLNPTNLFKSQVPIIQNMPNLLKLSSVLLLVLIPISSQLDEVFYAGFKDVGGNITLNGIAEIQNNGILKLTNETSRLMGHAFYPSPFQFKNSSSGEAFSFSTSFALAIVPEYPKLGGHGMAFTIATSKDLKALPSQYLGLLNSSDVGNFSNHLFAVEFDTVQDFEFSDKNDNHVGIDINSMVSNASETAGYYTDDSGSTKQDLNLKSGKAILVWVDYDSAANLISVTLSPSSSKPKKPILSFAVDLSPILEESMYVGFSASTGLLASSHYILGWSFKINGAAQALDLSSLPQLPAPKKKHTSLITGISVSVVVIVLSAILISVYLFRKIKNADVIESWELEIGPHRYSYKELKKATRGFKDKELLGQGGFGRVYRGTLPNSKTPVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGWCRRRGDLLLVYDFMANGSLDKYLFDEPETILSWEQRFKIIKDVASALLYLHEGYEQVVLHRDVKASNVLLDYELNGRLGDFGLARLYEHGANPSTTRVVGTLGYLAPELPRTGRATTGSDVFAFGALLMEVACGRRPIEPKALPEELVLVDWVWERYKEGRILDAVDPKLNGKFDEKELVMVVKLGLICSNDAPSARPSMRQLVRYLEGEVELPEDLRKPGEGGGHAEGFDEFLHSLASSSFDKMSSSSYTGHREMDASFPSFANSPLSLLHGKGETM 701
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1854 701 Gene3D - 43 280 - -
Glsi07g1854 701 FunFam L-type lectin-domain containing receptor kinase S.4 437 643 - -
Glsi07g1854 701 FunFam L-type lectin-domain containing receptor kinase S.4 39 285 - -
Glsi07g1854 701 Gene3D Transferase(Phosphotransferase) domain 1 437 642 - -
Glsi07g1854 701 CDD STKc_IRAK 366 632 - -
Glsi07g1854 701 FunFam Lectin-domain containing receptor kinase A4.3 345 436 - -
Glsi07g1854 701 Pfam Protein tyrosine and serine/threonine kinase 363 630 IPR001245 GO:0004672|GO:0006468
Glsi07g1854 701 ProSiteProfiles Protein kinase domain profile. 360 636 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1854 701 ProSitePatterns Protein kinases ATP-binding region signature. 366 389 IPR017441 GO:0005524
Glsi07g1854 701 SMART serkin_6 360 630 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1854 701 Gene3D Phosphorylase Kinase; domain 1 345 436 - -
Glsi07g1854 701 CDD lectin_legume_LecRK_Arcelin_ConA 45 281 IPR001220 GO:0030246
Glsi07g1854 701 SUPERFAMILY Concanavalin A-like lectins/glucanases 51 300 IPR013320 -
Glsi07g1854 701 SUPERFAMILY Protein kinase-like (PK-like) 342 634 IPR011009 -
Glsi07g1854 701 ProSitePatterns Serine/Threonine protein kinases active-site signature. 481 493 IPR008271 GO:0004672|GO:0006468
Glsi07g1854 701 Pfam Legume lectin domain 45 291 IPR001220 GO:0030246
Glsi07g1854 701 PANTHER - 38 637 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1854 Glsi-ChrGlsi07 61183398 61185503 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1854 36 659 Receptor kinase-like Gene Family AT3G55550 61.275 0.0 788
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi07g1854 PK_Tyr_Ser-Thr 2.7e-44 CL0016