LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi07g1852	ATGTTTTGTGCTCATTGGTTCTGTGGGTGTGCTAATTGGGCATACTTTGGTTCTGTGCTAATGTTTTATGGGTGTGCTCATGTGTTGTGGGTATATATTGGTAAATATTATGGTGGGTATATATTGGTCTATGCTCATTGGGCACATGTTAATCTTCCACTGGTAAGCTCCTACCTAAAAGATTTGTTGGCTAGTTCTTCTGGTCATGATCGATGTGTACGGAATGGGAATTATGATGAAGCGCTCGATTTGGAAGCATTTGTTTGTGAACTTTCAACTATGCATCCAAAGTTACCTGTTATTCAAGCATTGGCTGCAGAAGTTAGGCAGACCACCCAATCTCTTCTTTCTCAACTTATTCAGAAACTTCGGTCAAATATTCAGTTACCTGAATGCAGCCGCATTATTGGATTTGGATATTGGTGCCGAATAGTGGTATTTAGTGAGTATGAAATGCGATTGCAGATGCTGAGAGTTTCTTCTCAGCTTGACGAGGTTTTTTATGCTGGATTTAAGGATGTGGGTGACGACATAACCTTGAACGGAATAGCAGAAATCCAGAATAATGGAATACTGAAATTGACGAATGAGACCGGTGGTTTTATTGGTCATGCCTTCTATTCATCTCCATTTCAGTTCAAGAACTCCAGCAGTGGTGGAGCTTTCTCCTTTTCTACCTCATTTGCACTAGCTATAGTCCCTGAGTATCCCAACGTTGGTGGGCATGGCATGGCTTTTACAATAGCAACTTCTAAAGATCTCAAAGCTCTGCCCAGTCAGTATCTTGGCCTCCTTAATTCAAGTGATGTTGGGAATTTCTCAAATCATCTCTTTGCTGTTGAGTTCGACACCGTCCAAGATTTTGAATTTGGTGACAAGAACGACAACCACGTTGGAATCGACATCAACAGCTTGGTCTCCATTGCATCGGAGACCGCAGGTTATTACACCGACGATTCAGGTTCGACCAAACAAGATCTCCACCTCAACAGTGGGAAAGCGATTCTAGTATGGATTGATTACGATTCAGCTGCAAATCTCATCAGTGTCACCCTTTCTCCTTCTTCTTCGAAACCCAAAAAGCCAATCTTGTCATTCGCTGTAGATCTCTCTCCCATTCTTGAAGAATCTATGTATGTTGGTTTCTCTGCATCAACGGGTCTGCTGGCTAGCTCCCATTACATCTTGGGTTGGAGCTTCAAAATCAATGGAGCAGCTCAAGCCCTTGATCTCTCTTCTCTCCCACAACTTCCAGGACCGAAGAAGAAGCACACATCTCTAATTACAGGGATTTCAGTCCCAGTGGTCGTGATTGTGTTATCCGCGATCTTAATAAGCGTTTACCTTTTCAGAAAAATCAAGAACGCCGATGTGATAGAATCGTGGGAGTTAGAAATTGGGCCGCACAGGTACTCCTACCAGGAACTTAAGAAAGCAACTGGAGGTTTCAAGGACAAAGAGCTCCTCGGACAAGGTGGGTTTGGTCGAGTTTACCGAGGAACATTGCCAAATTCGAAAACCCAGGTTGCTGTTAAGCGAGTTTCGCATGAATCAAAACAGGGTCTGAGGGAATTCGTGTCGGAAATCGCCAGCATTGGCCGTCTCCGCCACCGGAACCTGGTTCAACTTCTGGGCAGGGCCACCACAAGCTCCGATGTGTTTGCATTTGGTGCACTTTTGCTGGAGGTTGCATGTGGTCGTAGACCCATTGATCCTAAGGCTCTTCTAGAAGAGTTAGTTCTGGCAGATTGGGTGTGGGAGAGGTACAAAGAAGGAAGAATACTTGATGTGGTGGACCCAAAACTAAATGGGAAATTTGATGAGAAAGAGGTGGTGATGGTGGTGAAACTGGGGTTGATTTGTTCAAACGATGTACCTAGTGCTAGGCCTAGTATGAGGCAATTGGTGAGGTATTTGGATGGAGAAGTTGAGTTGCCAGAGGATTTGAGAAAACCAGGAGAGGGAGGTGGTCAGTCGGAAGGGTTTGATGAGTTCTTGCCCTCACTTACATCTTCTTCATTTGATAAGATGAGCTCTAGCTCTTATACTGGACATAGAGAAATGTATGCTAGTTTTCCTTTGGATAATTCTCCTCTTTCCTTTCTCCATGGCAAAGGGGAAACTAGGTGA	2130	0.4413	MFCAHWFCGCANWAYFGSVLMFYGCAHVLWVYIGKYYGGYILVYAHWAHVNLPLVSSYLKDLLASSSGHDRCVRNGNYDEALDLEAFVCELSTMHPKLPVIQALAAEVRQTTQSLLSQLIQKLRSNIQLPECSRIIGFGYWCRIVVFSEYEMRLQMLRVSSQLDEVFYAGFKDVGDDITLNGIAEIQNNGILKLTNETGGFIGHAFYSSPFQFKNSSSGGAFSFSTSFALAIVPEYPNVGGHGMAFTIATSKDLKALPSQYLGLLNSSDVGNFSNHLFAVEFDTVQDFEFGDKNDNHVGIDINSLVSIASETAGYYTDDSGSTKQDLHLNSGKAILVWIDYDSAANLISVTLSPSSSKPKKPILSFAVDLSPILEESMYVGFSASTGLLASSHYILGWSFKINGAAQALDLSSLPQLPGPKKKHTSLITGISVPVVVIVLSAILISVYLFRKIKNADVIESWELEIGPHRYSYQELKKATGGFKDKELLGQGGFGRVYRGTLPNSKTQVAVKRVSHESKQGLREFVSEIASIGRLRHRNLVQLLGRATTSSDVFAFGALLLEVACGRRPIDPKALLEELVLADWVWERYKEGRILDVVDPKLNGKFDEKEVVMVVKLGLICSNDVPSARPSMRQLVRYLDGEVELPEDLRKPGEGGGQSEGFDEFLPSLTSSSFDKMSSSSYTGHREMYASFPLDNSPLSFLHGKGETR	709

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi07g1852	709	SUPERFAMILY	Cullin repeat-like	70	137	IPR016159	-
	Glsi07g1852	709	ProSitePatterns	Protein kinases ATP-binding region signature.	489	512	IPR017441	GO:0005524
	Glsi07g1852	709	ProSiteProfiles	Protein kinase domain profile.	483	709	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Glsi07g1852	709	MobiDBLite	consensus disorder prediction	664	681	-	-
	Glsi07g1852	709	PANTHER	-	181	545	-	-
	Glsi07g1852	709	Gene3D	-	167	405	-	-
	Glsi07g1852	709	Gene3D	Phosphorylase Kinase; domain 1	468	549	-	-
	Glsi07g1852	709	Pfam	Legume lectin domain	168	414	IPR001220	GO:0030246
	Glsi07g1852	709	Gene3D	Transferase(Phosphotransferase) domain 1	550	650	-	-
	Glsi07g1852	709	SUPERFAMILY	Concanavalin A-like lectins/glucanases	165	406	IPR013320	-
	Glsi07g1852	709	SUPERFAMILY	Protein kinase-like (PK-like)	469	639	IPR011009	-
	Glsi07g1852	709	CDD	lectin_legume_LecRK_Arcelin_ConA	168	404	IPR001220	GO:0030246
	Glsi07g1852	709	Pfam	Dor1-like family	67	159	IPR007255	GO:0017119
	Glsi07g1852	709	MobiDBLite	consensus disorder prediction	647	681	-	-
	Glsi07g1852	709	Pfam	Protein tyrosine and serine/threonine kinase	486	548	IPR001245	GO:0004672\|GO:0006468
	Glsi07g1852	709	FunFam	L-type lectin-domain containing receptor kinase S.4	162	408	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi07g1852	Glsi-ChrGlsi07	61144828	61151763	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi07g1852	545	652	Receptor kinase-like Gene Family	AT3G55550	62.963	1.11e-38	150

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_L-LEC	Glsi07g1852		Lectin_legB	6.7e-75	CL0004