Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1851 ATGTCTATCAAGCTTGGAATGATGGTGCTTTTGCTGGTGACAGTGGTTGTGAGTGAAAATGCCAGTTTCATCTATAATGGGTTTCAATTAGCGGATTTAACCATTGATGGTATCGCTGAGTTCACCTCCAATGGCCTACTCCGACTCACCAATGACACCAAGCAACGAAAGGGTCATGCTTTCTACCCCAGCCCAATAGTTTTCAAGAACTCCATTAATGCCAGCGTTAGTTCTTTCTCTACCACTTTTGTTTTCGCCATTAGATCTGAGTACCCCACTCTGAGTGGCCATGGAATCGCTTTTGTGGTTGCTCCAACAAAAGGGCTTCCAGGTGCTTTGCCCAGCCAGTACCTTGGCCTCTTCAATGAGACCAACAATGGCAAAGACAGCAACCATGTTTTCGCCGTAGAACTGGACACCATCCAGAGCACCGAGTTTGCAGACATCAACGATAACCATGTCGGAATTGACATTAATGACTTGAAATCAGCTAAATCCGCTCCTGCAGGATTTTACAGTGATGGGTTTAAGAATTTGAGCCTTATCAGTGGCTTACCAATGCAATTGTGGGTGGACTATGACGGAGGCAAGAGGCAACTTAGTGTTACCTTAGCTCCAATCAATTTTGGAAAACCAGAAATTCCATTGTTGTCTTTGACCCAAGATCTTTCTCCAATTCTAAACAATAGTATGTATGTTGGATTTTCATCCTCTACTGGGTCAGTCTTAACTTCCCACTATGTTCTAGGTTGGAGCTTCAAAGTCAATGGCGAGGCTCAAGAACTCGTAATCTCTGAACTCCCCAAGCTACCTCGACTAGGTTGTAAAGAACAACCTATGATTTTGATAGTTGGGTTACCCCTGATTTTAATCTGTGTGATTGTTCTGCTAACTTCAGCTATAGTTCATTTCATAAAGAGGAAAAAGAAGTTTTCTGAGCTGCTTGAAGATTGGGAGCAAGATTATGGTCCTCATAGGTTCAAATACGAAGATCTTTACTTTGCCACAAAGGGATTCAGGGAGAGGGAGCTTTTGGGCACTGGTGGATTTGGTCGGGTTTACAAAGGAATAATGCCAATCTCGAAAATTGAGGTTGCAGTGAAGAGGGTTTCCCATGAATCCCGACAAGGAATGAGGGAATTCGTAGCAGAAATCGTTAGCATTGGTCGTCTTCGCCACCGAAACCTGGTTCCTCTTCTGGGCTATTGCAGGCGCAAAGGAGAGCTTCTCTTGGTCTACGATTACATGCCGAATGGAAGCTTAGACAAGTACCTCTACAACCAACCCAGAGTGACGCTAAATTGGAGCCAGAGATTCAGAATCATCAAAGGGATAGCTTCGGGTCTGTTTTATCTACACGAAGAATGGGAGCAAGTCGTGGTGCACAGGGACATAAAGGCTAGCAATGTTCTGCTAGATGCAGAACTGAATGGCAGATTAGGTGACTTTGGCCTTGCAAGATTATACGACCATGGAACTGATCCTCAAACTACCCATGTGGTCGGAACTCTGGGTTACCTCGCCCCAGAACATGCAAGATTAGGCAGAGCCACAACAAGCTCCGATGTGTTTGCTTTTGGTGCGTTTATGCTTGAGGTTGTCTGTGGAAGAAGGCCTATAGAGCAAGGAGGGGGAAGTGACGGTGCAGTTTTGGTTGATTATGTTTATAGGTGCTGGAATAGGGGCGAGATTGTTGAGGCAAAAGATCCAAATTTGCGAACAGAGTATAGGGCAGAGGAGGTGGAGTTAGTGTTGAAACTAGGGCTTTTGTGCTCGCATTCAGATCCTTCCGCTAGGCCGAGCATTCGCCAAGTTGTGCAATACCTGGAGGGGGATGTGCCTCTGCCAAATTTGGCTTCGCTTAGCTTATCTTCATCTGGGTTAACTTTTGGGCATCGTCAAGAGTTTCATGACTCTGCAATGTTCTGCCCCTCTTCTATGGATGGGTCATTCTCTCAGACTTCTTCTGTAGCTGAATCGCATCTCTCCGGAGGGATTTCTTCTGCTCAGTACATATTGCAGCAGTATACAGCTGCTTCTGGAGGGCAAAACATTCAAAATTCCGTTAACAATGCTCATGCCATGGGAAAGATGAATCCAGACATGTGGTGTATGAAGCTTGCCCTTGGTGGCAGCAAGGTTCATGCTGGTTGCAATGGGAAACTTGTGTGGCGGCACACACCCTGGCTGGGTGCACATGCAGCAAAAGGGCCAGTTAGGCTTCTGCGACGTGCTCTTCAGAAAGCAGGACTTCTTATTCACTCTGAGTACTCGCATTTTACCCGTATTCAGAACAATGGCGATGATGCAGTTTATTGGGAAATCACGATAAATTCATTTCTAGACGACTACAGGCCTGTTGAGGGAATTATGATTGCTCACTCAGGTCGTTCTGTAGTAACGCTTTTCAGGTTTGAGGCTATAAGTGAAGCCTGTGAGCTTCCCCACGGTCAGAGGGTGAAAACTGCAGTTGCAGCAGCTGCATACAATGCCAAAGTTGCTCAACTACAGAAATCACATGAAAGCAATGTCAATAACGAGAAATTGTATGGAGATGAACCGCCACGAAGCTTCCAGAGGGTGGGATTAGTGGTTGGCGTTACCGGCATCGTGGGTAATAGCCTAGCTGAGATTCTACCTCTGGTCGACACACCCGGCGGACCATGGAAGGTCTACGGGGTCGCTCGCCGACCCCGACCCAACTGGAACGCCGATCATCCCATCGAATATATCCAGTGCAATATCTCGGACCCAAATGACACCGAAGCTAAGCTCTCCGGATTGACCGATGTGACCCACATCTTCTACGTCTCCTGGACCAGTCGACCTACCGAGGGTGAGAACTGCGAGGTGAATGGGGCTATGCTTAGGAACGTTCTCCGCGCCGTCATCCCAAATGCTCCGAATCTCCGCCACATATGCCTTCAGACGGGTTGCAAACACTATGTGGGGCCATTTGAGTTATTCGGAAAGATCAAACCCCATGACCCACCTTTCACCGAAGATTTGCCCCGACTCGAGGCACCCAACTTCTACTACACTCAAGAGGATATACTGTTTGAAGAGGCAGAGAAGAAAGAGGGCTTGACTTGGTCCGTTCACCGTCCGCAAGTGATATTCGGGTTTTCCCCTTATAGCTTGATGAACCTGATAGGGACGCTGTGTGTGTACGCCGCCATTTGCAAGCACGAGGGGCGTCCGTTGAAATTTCCCGGCCCTAAAGCCGCGTGGGAATGTTATTCTATAGCGTCGGATGCAGATTTGATAGCAGAGCAGCACATATGGGCGGCGGTGGACCCATATGCGAGGAACGAAGCTTTTAATTGCAGCAATGGGGATGTCTTCAAGTGGAAACATTTGTGGAAGGTGCTGGCGGAACAGTTTGGGATTGAGGAATACGGGTTTGAAGAAGGTTCCAATTTGAGGTTGTCGGAGATGATGAAGGACAAGGGCCCAACATGGGACGAGATTGTGAGAGAGAATGAGTTGCAGCCTACGAAACTGGAAGAGGTTGGGGACTGGTGGTTTGCAGATCTTCTATTTCGAGGGAAGGCATCGTTAGATAACATGAACAAGGCCAAAGAGCATGGCTTTCTGGGATTCAGGAACTCCAAGAATTCGTTTATAACTTGGATAGATAAGACTAAAGCTTACAAGATTGTGCCTTAA 3669 0.4721 MSIKLGMMVLLLVTVVVSENASFIYNGFQLADLTIDGIAEFTSNGLLRLTNDTKQRKGHAFYPSPIVFKNSINASVSSFSTTFVFAIRSEYPTLSGHGIAFVVAPTKGLPGALPSQYLGLFNETNNGKDSNHVFAVELDTIQSTEFADINDNHVGIDINDLKSAKSAPAGFYSDGFKNLSLISGLPMQLWVDYDGGKRQLSVTLAPINFGKPEIPLLSLTQDLSPILNNSMYVGFSSSTGSVLTSHYVLGWSFKVNGEAQELVISELPKLPRLGCKEQPMILIVGLPLILICVIVLLTSAIVHFIKRKKKFSELLEDWEQDYGPHRFKYEDLYFATKGFRERELLGTGGFGRVYKGIMPISKIEVAVKRVSHESRQGMREFVAEIVSIGRLRHRNLVPLLGYCRRKGELLLVYDYMPNGSLDKYLYNQPRVTLNWSQRFRIIKGIASGLFYLHEEWEQVVVHRDIKASNVLLDAELNGRLGDFGLARLYDHGTDPQTTHVVGTLGYLAPEHARLGRATTSSDVFAFGAFMLEVVCGRRPIEQGGGSDGAVLVDYVYRCWNRGEIVEAKDPNLRTEYRAEEVELVLKLGLLCSHSDPSARPSIRQVVQYLEGDVPLPNLASLSLSSSGLTFGHRQEFHDSAMFCPSSMDGSFSQTSSVAESHLSGGISSAQYILQQYTAASGGQNIQNSVNNAHAMGKMNPDMWCMKLALGGSKVHAGCNGKLVWRHTPWLGAHAAKGPVRLLRRALQKAGLLIHSEYSHFTRIQNNGDDAVYWEITINSFLDDYRPVEGIMIAHSGRSVVTLFRFEAISEACELPHGQRVKTAVAAAAYNAKVAQLQKSHESNVNNEKLYGDEPPRSFQRVGLVVGVTGIVGNSLAEILPLVDTPGGPWKVYGVARRPRPNWNADHPIEYIQCNISDPNDTEAKLSGLTDVTHIFYVSWTSRPTEGENCEVNGAMLRNVLRAVIPNAPNLRHICLQTGCKHYVGPFELFGKIKPHDPPFTEDLPRLEAPNFYYTQEDILFEEAEKKEGLTWSVHRPQVIFGFSPYSLMNLIGTLCVYAAICKHEGRPLKFPGPKAAWECYSIASDADLIAEQHIWAAVDPYARNEAFNCSNGDVFKWKHLWKVLAEQFGIEEYGFEEGSNLRLSEMMKDKGPTWDEIVRENELQPTKLEEVGDWWFADLLFRGKASLDNMNKAKEHGFLGFRNSKNSFITWIDKTKAYKIVP 1222
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1851 1222 FunFam Lectin-domain containing receptor kinase A4.3 324 415 - -
Glsi07g1851 1222 FunFam L-type lectin-domain containing receptor kinase V.9 20 260 - -
Glsi07g1851 1222 Pfam Legume lectin domain 21 267 IPR001220 GO:0030246
Glsi07g1851 1222 Gene3D - 860 1222 - -
Glsi07g1851 1222 Pfam Protein of unknown function (DUF620) 747 810 IPR006873 -
Glsi07g1851 1222 SUPERFAMILY Protein kinase-like (PK-like) 320 617 IPR011009 -
Glsi07g1851 1222 SUPERFAMILY Concanavalin A-like lectins/glucanases 21 274 IPR013320 -
Glsi07g1851 1222 CDD lectin_legume_LecRK_Arcelin_ConA 22 257 IPR001220 GO:0030246
Glsi07g1851 1222 SMART serkin_6 339 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1851 1222 ProSiteProfiles Protein kinase domain profile. 339 618 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1851 1222 CDD 5beta-POR_like_SDR_a 861 1161 - -
Glsi07g1851 1222 PANTHER - 21 624 - -
Glsi07g1851 1222 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 863 1132 IPR036291 -
Glsi07g1851 1222 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Glsi07g1851 1222 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Glsi07g1851 1222 Pfam Protein kinase domain 340 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Glsi07g1851 1222 CDD STKc_IRAK 345 611 - -
Glsi07g1851 1222 FunFam L-type lectin-domain containing receptor kinase S.4 416 622 - -
Glsi07g1851 1222 FunFam Iridoid synthase 858 1222 - -
Glsi07g1851 1222 Gene3D - 19 267 - -
Glsi07g1851 1222 Gene3D Phosphorylase Kinase; domain 1 324 415 - -
Glsi07g1851 1222 Gene3D Transferase(Phosphotransferase) domain 1 416 614 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1851 Glsi-ChrGlsi07 61123608 61135358 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1851 13 665 Receptor kinase-like Gene Family AT3G53810 63.030 0.0 845
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Glsi07g1851 Pkinase 2.1e-45 CL0016