Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1842 ATGAAGCTAGACGAAGATCTGCTTCCTGATCGTGAGGTTGAGTTCCAAACTGATGATGAAGAAAACCAGGGAGAGAGGGTGTTTGAAAATTTGGACGACGAGTCCGAATCAGACATTTCACAACATTCTCGTATCTTGTCCAACGACATGGACATCATTAATCCCACATGGCCCCAGAGCTATCGGCAATCTATGGACTTGTTAACTAGTGTAACACCACCCCCAGTTAGTTTCCTAAGGGGGATGAGTTCAACAGGGATAAGCAGCTCTTTTACTACAGCTCTCAAGAGACCTCAGAGATATGATTCTGCTTTGACTACACCCCTCATTCCCAACAGTAGTTCATTCAAACAAGAGGAGCTTACCTCAACAGGCCCCGTGCTATCTCGCCTATCTAGCTGCTCAAAATTTTCTAGTTGTGAATTGCCACCACCTCAGGAGCAATGTTCATTAGGACAGTCAATCCTTAATGGAACAAATATATTATGTGGGATAGGACTTCTTACAATGCCATATGCAGTAAAAGAAGGTGGATGGTTGAGCCTTATAATACTTTTTTTGTTTGCTATTATGTGCTGCTATACTGGGATTTTGTTGAAGAGATGTTTAGAAAGCTCTCCTGGACTCCAAACCTATCCAGATATTGGGCAGGCTGCTTTTGGAATAGCTGGCCGCCTAGGGATTGCGCTAGTTTTGTACATGGAACTATATGCTTCTTGTATTGAGTTCATAATACTAATGAGTGATAACCTCTCATCACTTTTCCCTAACACCCACATGAGCTTCGCTGGGATCAATTTAGACACTCATCAAACTTTTGCCATTGCATCAGCACTTTGTGTTCTGCCAACAGTTTGTCTACGAAACCTAAACCTGCTTTCATTTCTTTCGGTTGGAGGAATATCTGCATCAATATTGGTATCATCCTGCTTGTTATGGGTTGGGGTGATAGACCAAGTTGGGTTTCATCCAGGTGGAAAAGCTTTAGACCTTGCAAACCTATCTGTCTCAATTGGTCTCTATGGTTTTGGCTTTTCTGGCCATTCAGTTTTTCCAAACATCTATTCTTCAATGAAGGAACCATCGAAGTTTCCTTTAGTTCTAATAGCCAGCTTTGCCTTTTGTTTTGTTCTGTACACAGGAGTATCTACATTGGGCTATTTAACCTTTGGTGACTCAGTTGAATCTCAGTTTACGTTAAACATGCCCAAAGAACTGTATGCTTCCAAAATTGCAACATGGACAACAGTTGTGAACCCTTTGGCAAAGTATGCCTTCACATTGTTACCTGTTGCACTGAGCATAGAAGAACTCCTACCTTCTCCTGGGCCAAGATGTTATGCTACGTCAGTTCTTATCAGAATAGTTTTGGTATTCTCAAACTTGGTTTTGGCCCTCTGTGTTCCATTTTTTGGTTTTTTGCTGGCATTGATTGGCTCTTCAATGGCAATGCTAGTTGCACTTATTTACCCTTGTGCATGTTATCTCAAGCTACACCAAGGCAGATTATCAAAAGTGGAGGTGGCAAATTGCATTTTTATCATTATTGTGGGGGTGGTGTGCTCTATTATTGGCACATATTCAGCAGTTTCAAGAATAGCTGGCAAGGGAGACTGA 1617 0.4174 MKLDEDLLPDREVEFQTDDEENQGERVFENLDDESESDISQHSRILSNDMDIINPTWPQSYRQSMDLLTSVTPPPVSFLRGMSSTGISSSFTTALKRPQRYDSALTTPLIPNSSSFKQEELTSTGPVLSRLSSCSKFSSCELPPPQEQCSLGQSILNGTNILCGIGLLTMPYAVKEGGWLSLIILFLFAIMCCYTGILLKRCLESSPGLQTYPDIGQAAFGIAGRLGIALVLYMELYASCIEFIILMSDNLSSLFPNTHMSFAGINLDTHQTFAIASALCVLPTVCLRNLNLLSFLSVGGISASILVSSCLLWVGVIDQVGFHPGGKALDLANLSVSIGLYGFGFSGHSVFPNIYSSMKEPSKFPLVLIASFAFCFVLYTGVSTLGYLTFGDSVESQFTLNMPKELYASKIATWTTVVNPLAKYAFTLLPVALSIEELLPSPGPRCYATSVLIRIVLVFSNLVLALCVPFFGFLLALIGSSMAMLVALIYPCACYLKLHQGRLSKVEVANCIFIIIVGVVCSIIGTYSAVSRIAGKGD 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1842 538 MobiDBLite consensus disorder prediction 1 25 - -
Glsi07g1842 538 FunFam Amino acid transporter AVT1A 147 536 - -
Glsi07g1842 538 PANTHER OS05G0424000 PROTEIN-RELATED 158 523 - -
Glsi07g1842 538 Pfam Transmembrane amino acid transporter protein 149 529 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1842 Glsi-ChrGlsi07 60996827 61000286 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1842 1 536 Amino Acid or Auxin Permease AAAP Family AT5G02180 53.915 0.0 581