Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1817 ATGTACTTAGTATTTGAATCACAGATTTCACCATCGTTACTCAAAGCCATCCAAGGATCAAGGATAGCCATCCTCGTGTTCTCTCAAAACTATGCCTCCTCCACATTCTGTTTATTTGAACTTGTCCAAATCCTTGAGCACTTACATGGACAAGGTCGGTTGGTTTTACCTGTATTTTACGATGTGGATCCATCAGAGGTGAGAAAACAGAGTGGGAATTATGCACAAGCATTGGCTAAGCACGCCGAAAAGTCTAAAAATGACGAAGAGAAAGTTCAGAAATGGAAATTGGCTCTGCATCAAGCAGCTAATTTGAAAGGATGTCATTTTAAACACGGAGTCAACATGATAGGGATATATGGAATTGGTGGGAGTGGGAAATCAACAATTGCTCGTGGTTTGTATAATTTGATTGCTGATCAGTTTGAATGTGTATGTTTTCTTGCTGATATTAGAGAAAAATCGCTTAAGCTTGGCCTAGTATCACTGCAAGAAACTCTTCTTTTTGAATTTGTGAAGGCGGATATCAAATTGGGAAATGTCAACCAAGGAGTTTCAATTTTAAAAAGTAGCCTCCATGAAAAGAAAGTTCTTCTCATCCTTGATGATATTGACAATATTAAGCAGTTAAGAGCATTAGCTGGTGCACCCGATTGTTTATCTATGTCTAACTGCGGAAGTATTCGGTTACCAAGTAATATTGGTTTGTTGGGAATAGTTGAAATTGTCATTGATTCTTGTGGAGAATTGCAATTTTCTAAACTGGATGAACGCCAAGAAGAATTTAATCCTTATTTAAAAGTGGGTCTTACCCTCTGTGATAGCAATATATCAGATGAGACACTTCCAATATGTCTTACATTTTTTGCCTATACGAGGTATTTAGACCTGTCAGAAGCAGAACCAGGGGGTTGTATTCATGCCCTGGGAAGCATAAATACTGAATTTGATTCATATTTCAAGCAACGTGCTGAGGATGAGCTCAAGAAAAGCAATGCAAAACCTAGTTCAAGCCGTGATATTATTTCTTCACCAGCCGAATCAATAAAACTTTCTGAGGTCCCTCAAGTTGGAACAGGGAAAGCAGGGGGATCTGTTGTGGTTACTGGGTCTGATGATAGGTCCATTTTGTTAAACAAAGATAAAATGCTGCAACTACAACCAGAATCATGCTTCCATACAGCTACAGGAATAGAGGAAAGATTTCATGGTTGTTTGGTAGAAGCAGAACTAGAGGGTGATATTCATGCCCTGGGAAGCATAAATACTGAGTTTGATTCATATTTTAAGCAACGTGCTGAGGATGAGCTCAAGAAAAGCAATGCAAATCCTAGTTCAAGCCGTGGTGTTGTTTCTTCACCAACCGAATCAATAAAACATTCTGAGGTCCCTCATGTTGGAAAAGGGAAAGCAGGAGGATCTGTTGTGGTTGCTGGCTCGAATGATAGGTCCATTTTGTTAAACGAAGATAAAATGCTGCAACCACAACCAGCATTACTCTTTCATACAGCTACAGGAATAGTTCTTTCTTCTGACTCTGAAGAAGAGGATTCTGAAGAACAGGACTTAAACAATAAGGCGTGCCTTGCCCTGCCTTCCTGGAAGCAAACACCTTTGGATGATGAGAATAGGACATCATTTTCATTGGTACATGCTAGTGACGCCATTGGTAGTAACCACGAGGAACAATTTCATAGTTGTTTAGTAGAAGCAGAACTAGAGGGTGGTATTCATGCCCTGGGAAGCTTAAATACTAAATTTGGTTCATATTGTAAGCAACGTGCTGAGGATGAGTTCAAGAACAGTAATGCAAATCCTAGTTCAAGTCGTGATGTTGTTTCTTCACCAGCCGAATCAATAAAACTTTTTGAGGTCCCTTATGTTGGAAAAGGGAAAGCAAGGGGATCTGTTGTGGTTGCTGGCTCTGATGATAGGTCCATTTTGTTAAACGAAGATAAAATGCTGCAACCACAACCAGAATTACTCTTCCATACAGCGACAGGAATAGATTTGCAGCAGCAACAAAATTTTACTTCTATTAGTCAAGAAATTCAAAAAAGTTCTATAAGTCAACCAATTTCAAAAAGCTTTGAAAATATCAGAATAGCCAAACGAAACAGAGACAACACTGATGAAGGAAAGGACAGCAATATGTTAGAGATGACCAAAGCACTAAAAGGGCTAAAAGCTAGGAGGAATGAGACCCCAGCAAAGAAGATACTGGTGGCAACATGGGACAATGAAATTGCACCACCACCTTAA 2262 0.3939 MYLVFESQISPSLLKAIQGSRIAILVFSQNYASSTFCLFELVQILEHLHGQGRLVLPVFYDVDPSEVRKQSGNYAQALAKHAEKSKNDEEKVQKWKLALHQAANLKGCHFKHGVNMIGIYGIGGSGKSTIARGLYNLIADQFECVCFLADIREKSLKLGLVSLQETLLFEFVKADIKLGNVNQGVSILKSSLHEKKVLLILDDIDNIKQLRALAGAPDCLSMSNCGSIRLPSNIGLLGIVEIVIDSCGELQFSKLDERQEEFNPYLKVGLTLCDSNISDETLPICLTFFAYTRYLDLSEAEPGGCIHALGSINTEFDSYFKQRAEDELKKSNAKPSSSRDIISSPAESIKLSEVPQVGTGKAGGSVVVTGSDDRSILLNKDKMLQLQPESCFHTATGIEERFHGCLVEAELEGDIHALGSINTEFDSYFKQRAEDELKKSNANPSSSRGVVSSPTESIKHSEVPHVGKGKAGGSVVVAGSNDRSILLNEDKMLQPQPALLFHTATGIVLSSDSEEEDSEEQDLNNKACLALPSWKQTPLDDENRTSFSLVHASDAIGSNHEEQFHSCLVEAELEGGIHALGSLNTKFGSYCKQRAEDEFKNSNANPSSSRDVVSSPAESIKLFEVPYVGKGKARGSVVVAGSDDRSILLNEDKMLQPQPELLFHTATGIDLQQQQNFTSISQEIQKSSISQPISKSFENIRIAKRNRDNTDEGKDSNMLEMTKALKGLKARRNETPAKKILVATWDNEIAPPP 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1817 753 Gene3D - 3 121 IPR035897 -
Glsi07g1817 753 SMART till_3 1 105 IPR000157 GO:0007165
Glsi07g1817 753 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 7 215 IPR044974 GO:0006952
Glsi07g1817 753 MobiDBLite consensus disorder prediction 442 459 - -
Glsi07g1817 753 Pfam TIR domain 8 101 IPR000157 GO:0007165
Glsi07g1817 753 PRINTS Disease resistance protein signature 116 131 - -
Glsi07g1817 753 PRINTS Disease resistance protein signature 191 205 - -
Glsi07g1817 753 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 107 IPR035897 -
Glsi07g1817 753 ProSiteProfiles TIR domain profile. 1 138 IPR000157 GO:0007165
Glsi07g1817 753 Pfam NB-ARC domain 114 211 IPR002182 GO:0043531
Glsi07g1817 753 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 112 213 IPR027417 -
Glsi07g1817 753 MobiDBLite consensus disorder prediction 436 472 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1817 Glsi-ChrGlsi07 60562240 60574155 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1817 14 216 WRKY Transcription Factor Family AT4G12020 24.701 5.85e-15 77.4