Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1781 ATGAAAGATCATATTCAACATTCAAGGTCCCAAGAAGAGATCGTGAGGAATGTCGACAGAGATGACAAGTCCCCACCACACTCGCCGCCCAAAACAGACAAGGCATTGGACACTCTGCTACGTGCATTTATGGACTCTGTAACTGTTGGAGGCTTGCGTCTTCAATTTGTCAGCTCTCAGGAGGGTGCATCCACAGAACCCTACTTATTCCCTCTCTGTCTCTCTGTGCATGGACTGGAACCTCACTTGAATGCTCCTCTAAAAGGAACATCAGCGGAAATGTCCCGAGCAGGTTCATCAAGATGGAGCCCAACACCAGAGCAGCTCATGATCTTGGAGGAACTGTACAGGAGTGGGATTAGAACTCCTACTGCTTCCCAAATTCAACACATAACAACCCACCTTTGTTTCTATGGTAGGATTGAAGGAAAGAATGTATTTTATTGGTTTCAGAACCACAAGGCTAGGGATAGGCAGAAGCTCAGGAGGAAACTAAACAAGCAACTGCAGCTACAGCAACAACTGCAAGTCCATCATTGCCAACAGAATCAGGCTCACAGTCAGTATTTTTTTGGTGGCTTTGATTCTCCTCCTGGTTCTTCTGCCCAACAACTTTCTTTATACAACTCAGCTATCTTGCTTTCTCAGGGAGAAGCTGCAGACACATCAGAACAGGCAACAAATTGCACATGGAGTGTGCAAAACCCACAAAATGTGGTGGAGAAAACAGAGATGACACTCTGCAACTACAGTTGGACTCTCCTTGATGCTAATAATCAAGCATCCTCATGCTGGACTCGTCCTCTTAAGACTCTTGACCTCTTTCCAACCACAGCTACCAAACTCAAAGAAGACAAGCAGCTCTATCATTCCATGTCCACCAAATAA 888 0.455 MKDHIQHSRSQEEIVRNVDRDDKSPPHSPPKTDKALDTLLRAFMDSVTVGGLRLQFVSSQEGASTEPYLFPLCLSVHGLEPHLNAPLKGTSAEMSRAGSSRWSPTPEQLMILEELYRSGIRTPTASQIQHITTHLCFYGRIEGKNVFYWFQNHKARDRQKLRRKLNKQLQLQQQLQVHHCQQNQAHSQYFFGGFDSPPGSSAQQLSLYNSAILLSQGEAADTSEQATNCTWSVQNPQNVVEKTEMTLCNYSWTLLDANNQASSCWTRPLKTLDLFPTTATKLKEDKQLYHSMSTK 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1781 295 SUPERFAMILY Homeodomain-like 94 162 IPR009057 -
Glsi07g1781 295 CDD homeodomain 101 160 IPR001356 GO:0003677
Glsi07g1781 295 ProSiteProfiles 'Homeobox' domain profile. 95 160 IPR001356 GO:0003677
Glsi07g1781 295 Pfam Homeodomain 100 159 IPR001356 GO:0003677
Glsi07g1781 295 PANTHER WUSCHEL-RELATED HOMEOBOX 1-RELATED 88 285 IPR044555 GO:0003700|GO:0099402
Glsi07g1781 295 FunFam WUSCHEL-related homeobox 11 99 166 - -
Glsi07g1781 295 MobiDBLite consensus disorder prediction 1 34 - -
Glsi07g1781 295 Gene3D - 91 160 - -
Glsi07g1781 295 SMART HOX_1 97 164 IPR001356 GO:0003677
Glsi07g1781 295 MobiDBLite consensus disorder prediction 1 30 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1781 Glsi-ChrGlsi07 59398964 59402061 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1781 94 167 Wox Gene Family AT2G28610 82.432 3.09e-39 136
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-WOX Glsi07g1781 Homeodomain 1.7e-17 CL0123