Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1773 ATGCTTCCAGCAAGCAAGGGACTTTCCTCAATTATACATCTTGATCTTGACACTTTGCAAAACCTTGATACATTCTGGGTTTCATTGAGTGTTTTTCCTCCTAAAAGTGTGAAGCTGAAAAGACCATTTGCTATTAAACCCTGGATGAACTCAGAGGAGAATGTTGGCAATGTTCTCATGCTTGATTTGAGGCTTCTAAGCTTGCGGTTTGAAAGCTCTGGTGGTGTATTTCAGGTTTGGAGATTTTTGATTACTTTTGCAGATGTGCTTGGGTTATGGCCTTTTACCCTTGATGAATTTCTGCAGGCATTTCATGACTATAGCCCAATGCTTGACATTAATATTAATAATAATGAAGCTTCACCCAGCACTGCTGAAAACCAAAAAGTAGTTCTTGGGGCACAGAGCACGCCTCTTGAAAAGCCCTCAGTTGTTCAAGATCTCTTTGCAGGTCCAGATAACCTTCAGACTCTATCTGCCCATACTTCGAAAAGGTCTCGTTCACAGTTGAAGTCTTATATTGCACATATAGCAGAAGAGATGTATGTATACAGGTCCTTGCCCCTTGGTCAAGATCGGAGACGTAATCGATATTGGCAATTTGTTGCATCTACTTCTAGCAATGATCCAGGTTCTGGCAGGATCTTTGTCGAATTACATGATGGCAATTGGAAGCTTATTGATTATGAAGAGGCCTTTGATGCACTGTTGACATCACTTGATACTCGTGGGATCAGGGAATCTCATTTGCGCTTAATGTTGCAAAATATTGAGAATTCCTTTAGAGAAAATGTTCGAAAGAATGTCCAATGTGCTAAAATTGCAAGCAGAGGGGAAATTTCAATTAAAAATGAAGCTGATGCAATAGATTCCAACCCTGATCACGATGCTGGATCTGACAGTCCTAGCAGTACTCTTCATGATTTGACTTCTGATAATACATTGGAAACTTCATCATCCTTTAAAATTGAGCTTGGGAAAAGTGAGAGTGAAAGGAAAGCTGCCTTGAGAATGTTTCAAGATTTTCAAAAGTGGATATGGAAAGAAAGCTATAATTCATCAACATTATGTGCAATGAAATATGGGAAAAAGAGATGCAAACCATTGGTGGACATCTGCGATATGTGTTTGAACCCTTATTTCTTTGAAGACTCCCATTGCAATTCTTGCCACCGTACATTTCCTGCTGATAATGGATTTAATTTTTCTAAACATGCATTTCAATGTGGAGAGAAGTTAGACTCCAAAGTTAATTGTGTTTTGGATTCTTCTCTTCCATTGCGAACAAGATTGCTGAAGGCCCTGTTGGCTTATATTGAGGTGTGTGTTCCTCTTGAAGCATTTCGATCAATTTGGACTGAAGAGATTAGGAAGCAGTTGGGGGTGAAGTTGAGCAAATCATCTTCGATTGATGAACTTTTGAAGGCAATGTTTGATCCAAAGGTTGAAGCTCGCGTGGCTGGTGCAATATTTACTTCACCTGCAGCTGATACAGTGACCGATCCTAATGCTTCTCAAAAACTGTATGAAGGGGCCTCCTCATCTGACAAAAATATCAAATTATATGAAGGGTTGTTACATGACCTCCTTTTTGAACCGGAACGAGATGCTATCATCCAGGACATAATTCAGTGGATGAATAGTAGGATATGA 1653 0.3962 MLPASKGLSSIIHLDLDTLQNLDTFWVSLSVFPPKSVKLKRPFAIKPWMNSEENVGNVLMLDLRLLSLRFESSGGVFQVWRFLITFADVLGLWPFTLDEFLQAFHDYSPMLDININNNEASPSTAENQKVVLGAQSTPLEKPSVVQDLFAGPDNLQTLSAHTSKRSRSQLKSYIAHIAEEMYVYRSLPLGQDRRRNRYWQFVASTSSNDPGSGRIFVELHDGNWKLIDYEEAFDALLTSLDTRGIRESHLRLMLQNIENSFRENVRKNVQCAKIASRGEISIKNEADAIDSNPDHDAGSDSPSSTLHDLTSDNTLETSSSFKIELGKSESERKAALRMFQDFQKWIWKESYNSSTLCAMKYGKKRCKPLVDICDMCLNPYFFEDSHCNSCHRTFPADNGFNFSKHAFQCGEKLDSKVNCVLDSSLPLRTRLLKALLAYIEVCVPLEAFRSIWTEEIRKQLGVKLSKSSSIDELLKAMFDPKVEARVAGAIFTSPAADTVTDPNASQKLYEGASSSDKNIKLYEGLLHDLLFEPERDAIIQDIIQWMNSRI 550
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1773 550 PANTHER HOMEOBOX-DDT DOMAIN PROTEIN RLT2 115 477 IPR044977 GO:0006357
Glsi07g1773 550 MobiDBLite consensus disorder prediction 296 312 - -
Glsi07g1773 550 Gene3D alpha/beta hydrolase 479 550 IPR029058 -
Glsi07g1773 550 ProSiteProfiles DDT domain profile. 70 130 IPR018501 -
Glsi07g1773 550 Pfam Williams-Beuren syndrome DDT (WSD), D-TOX E motif 185 257 IPR028941 -
Glsi07g1773 550 MobiDBLite consensus disorder prediction 285 312 - -
Glsi07g1773 550 Pfam DDT domain 74 111 IPR018501 -
Glsi07g1773 550 SMART testlast3 70 120 IPR018501 -
Glsi07g1773 550 Pfam Serine aminopeptidase, S33 495 534 IPR022742 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1773 Glsi-ChrGlsi07 59200901 59204717 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1773 161 477 Homeobox Transcription Factor Family AT1G28420 48.265 5.96e-81 275
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR DDT Glsi07g1773 WSD 1.5e-14 No_clan