LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Glsi07g1764	ATGGCGGTCGTGAAGCTTTTCTCAATCTACATTTTCGTGTCCTTATTCTTCAGCTACAACAAAGCCAGTGCCTTCACAGAGTTTTTGTCTTCATCTGCTTCTTCGGATGTGGAGCTTCTTTTGGGAAAAATCAGAGCTTCACTGCAAGGTAACGATGAGAACCTTGTTTTGTCTTCATGGAACTCCTCTATACCACTTTGCCAGTGGAGGGGCCTTAAATGGGTCTTCTCCAATGGCTCTCCTCTGTCATGCAGTGACTTGTCCTCACCACAATGGACTAATCTTTCACTGTTCAAAGACCCCTCTGTGCACCTACTCTCTCTTCAACTTCCATCTGCCAATCTCTCTGGTTCACTCCCTAGAGAGCTTGGAGAATTTCCTATGCTTCAAAGTCTATATCTCAACATCAATTCGTTGAAAGGAACCATCCCTCTTGAGCTTGGTTATAGTTCCTCGCTCTCTGACATCGATTTGGGTGATAATTTGTTGAGTGGAACTGTGCCCCCATCGATCTGGAATTTGTGTGATAGGCTCGTTTCCCTTAGAGTCCACAGTAATTCGCTGTCTGGGTCTCTTCCTGAACCGGCATTGCCAAACTCTTCTTGCAAGAATCTGCAATTTCTTGATTTAGGGAACAACAAGTTTTCTGGGAATTTCCCGGAATTCATTACCCGTTTTGGTGGGCTAAAACAGCTTGACTTGGGGAACAATATGTTTATGGGTTCAATTCCTCAGGGCTTAGCTGGGCTAAGGCTTGAGAAATTGAATCTTTCCCACAACAATTTTAGTGGTGTTTTACCTTTTTTGGGAGAATCCAAATTTGGTGTGGAGGTTTTTGAAGGAAATAACCCTGGCTTGTGTGGACCACCTTTGGGAAGTTGTAGTGGAACTTCTAGATTGAGTTCTGGTGCAGTTGCTGGCATAGTTATCACTCTGATGACTGGAGCTGTGGTTTTAGCTTCTTTGCTTATTGGGTATATGCAAAACAAGAGGAGAAAGGGTAGGGGAGAGAGTGAAGATGAATTGGAGGAAGATGAAGATGAAGAAAATGATGGTAATGCTATTGGTGGAGGTGGTGAAGGGAAGCTTATGTTCTTCCAAGGCGGTGAGAATTTGTCATTAGATGATGTGTTGAATGCAACGGGGCAAGTTATGGAAAAGACATGTTATGGAACTGTATATAAGGCAAAGCTTGCTGATGGGGGGACCATTGCTTTGAGGTTATTGAGAGAAGGTAGCTGCAAGGATAGGACTTCATGCTTGCCAGTGATTAAGCAATTGGGAAGGATTCGCCATGAGAATTTGATTCCTTTGAGAGCCTTCTATCAGGGGAAGAGAGGGGAGAAGCTCCTTATTTATGACTATCTCCCTCTCAGAACTCTTCATGATCTTTTACACGAAACTAAAGCAGGAAAACCGGTGCTGAACTGGGCTAGGCGACATAAGATTGCGTTGGGTATAGCCAGGGGGCTATTATATCTTCATACAGGATTTGATGTTCCAATTACTCATGGGAATGTAAGATCCAAGAATGTTCTTGTGGATGAGTTTTTTGTTGCAAGGCTTTCCGAGTTTGGGCTTGATAAGTTAATGATTCCTGCTGTTGCTGATGAAATGGTGGCACTTGCTAAGACTGATGGCTACAAGGCTCCAGAGCTTCAAAAGATGAAGAAATGTAATCCCTGGACAGATGTTTATGCATTTGGGATATTATTGTTGGAGATTTTGATTGGAAAGAAACCTGGAAAAAATGGGAGAAGTGGTGAATTCGTGGATTTACCTTCAATGGTGAAAGAAGCAGTTTTAGAGGAGACAACAATGGAAATTTTTGATGGGGAACTTCTGAAAGGGATACGAAGCCCTATGGAAGATGGGTTGTTCCAGGCATTGAAGCTAGCAATGGGTTGCTGCGCCCCGGTAGCTTCAGTTAGACCTGGCATGGAGGAAGTTGTAAGACAGTTAGAAGAGCATAGACCAAGGAATAGGTCTGCTTTATACAGCCCTACAGAAACAAGAAGTGGGAGTGGCACCCCATTTTGA	2040	0.4353	MAVVKLFSIYIFVSLFFSYNKASAFTEFLSSSASSDVELLLGKIRASLQGNDENLVLSSWNSSIPLCQWRGLKWVFSNGSPLSCSDLSSPQWTNLSLFKDPSVHLLSLQLPSANLSGSLPRELGEFPMLQSLYLNINSLKGTIPLELGYSSSLSDIDLGDNLLSGTVPPSIWNLCDRLVSLRVHSNSLSGSLPEPALPNSSCKNLQFLDLGNNKFSGNFPEFITRFGGLKQLDLGNNMFMGSIPQGLAGLRLEKLNLSHNNFSGVLPFLGESKFGVEVFEGNNPGLCGPPLGSCSGTSRLSSGAVAGIVITLMTGAVVLASLLIGYMQNKRRKGRGESEDELEEDEDEENDGNAIGGGGEGKLMFFQGGENLSLDDVLNATGQVMEKTCYGTVYKAKLADGGTIALRLLREGSCKDRTSCLPVIKQLGRIRHENLIPLRAFYQGKRGEKLLIYDYLPLRTLHDLLHETKAGKPVLNWARRHKIALGIARGLLYLHTGFDVPITHGNVRSKNVLVDEFFVARLSEFGLDKLMIPAVADEMVALAKTDGYKAPELQKMKKCNPWTDVYAFGILLLEILIGKKPGKNGRSGEFVDLPSMVKEAVLEETTMEIFDGELLKGIRSPMEDGLFQALKLAMGCCAPVASVRPGMEEVVRQLEEHRPRNRSALYSPTETRSGSGTPF	679

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Glsi07g1764	679	Pfam	Protein tyrosine and serine/threonine kinase	383	653	IPR001245	GO:0004672\|GO:0006468
	Glsi07g1764	679	Gene3D	Transferase(Phosphotransferase) domain 1	457	671	-	-
	Glsi07g1764	679	MobiDBLite	consensus disorder prediction	664	679	-	-
	Glsi07g1764	679	Pfam	Leucine rich repeat	204	262	IPR001611	GO:0005515
	Glsi07g1764	679	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	24	194	IPR046959	-
	Glsi07g1764	679	MobiDBLite	consensus disorder prediction	333	357	-	-
	Glsi07g1764	679	SUPERFAMILY	L domain-like	71	290	-	-
	Glsi07g1764	679	Gene3D	Ribonuclease Inhibitor	176	247	IPR032675	-
	Glsi07g1764	679	Gene3D	Ribonuclease Inhibitor	38	175	IPR032675	-
	Glsi07g1764	679	FunFam	LRR receptor-like serine/threonine-protein kinase ERECTA	100	192	-	-
	Glsi07g1764	679	Gene3D	Phosphorylase Kinase; domain 1	360	455	-	-
	Glsi07g1764	679	FunFam	Leucine-rich repeat receptor-like protein kinase	202	294	-	-
	Glsi07g1764	679	SUPERFAMILY	Protein kinase-like (PK-like)	387	655	IPR011009	-
	Glsi07g1764	679	MobiDBLite	consensus disorder prediction	656	679	-	-
	Glsi07g1764	679	Gene3D	Ribonuclease Inhibitor	248	298	IPR032675	-
	Glsi07g1764	679	ProSiteProfiles	Protein kinase domain profile.	379	679	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Glsi07g1764	Glsi-ChrGlsi07	58994283	58998080	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Glsi07g1764	6	679	Receptor kinase-like Gene Family	AT3G24660	74.667	0.0	951

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Glsi07g1764		PK_Tyr_Ser-Thr	3e-23	CL0016