Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Glsi07g1761 ATGGTGCTGATACTACAGGATGAGAATGAGAAGCAAGAAGTGAATCCCTCGGAAACTGCAACAACTGCAGAATCATCCGCCGCCTCCAATGTCGATGCCAATAAGGAAGCTTCCGATGGCTTTGAAACCGCCAGCGACGCTGAGCTCGGCAGCGACGGAGACGATGACGACGCCGGAGCTAGCAGCCGCGGTGGGGATGCACATAAAGAACAGGGACAACAACATCATCATCAGGAGCAAGAGAAGGGTGTTCCTCCGAGAAGCGATTCTTCCGAAGATGCCTCAAACAATGAGGAATTGGAACAGAAAGCATTGGCTCAAGCAAATGATGCAAAAGTAGAAGGGAATAAATTGTTTGGAGATGGGCAATATGACGAGGCATTATCAAAGTATGAACTTGCTTTACAAGTTGCCCCAGACATGCCTTCATCTGTGGAAATACGCTCAATATGCCATTCAAACAGTGCTGTATGCTTCTTTAAATTGGGAAAATATGAGAATACAATCAAAGAATGCACTAAAGCATTAGAACTCAATCCTGTATATGTTAAAGCTTTGGTGAGAAGAGGCGAGGCTCATGAAAAGCTTGAACATTTTGAAGAGGCCATTGCTGATATGAAAAAGATTTTAGAAATTGATCCCTCAAATGATCAAGCTAGGAGAACCATTCGAAGACTGGAACCCCTGGCTGCAGAAAAGCGGGAAAAGATGAAGGAAGAAATGATTGGTAAACTGAAAGAAATGGGCAATTCTGTGTTGGGCCGCTTTGGGATGAGCGTGGACAACTTTAAAGCTGTTAAAGATCCGAACACTGGTTCCTATTCTATCTCATTCCAACGCTAA 843 0.4437 MVLILQDENEKQEVNPSETATTAESSAASNVDANKEASDGFETASDAELGSDGDDDDAGASSRGGDAHKEQGQQHHHQEQEKGVPPRSDSSEDASNNEELEQKALAQANDAKVEGNKLFGDGQYDEALSKYELALQVAPDMPSSVEIRSICHSNSAVCFFKLGKYENTIKECTKALELNPVYVKALVRRGEAHEKLEHFEEAIADMKKILEIDPSNDQARRTIRRLEPLAAEKREKMKEEMIGKLKEMGNSVLGRFGMSVDNFKAVKDPNTGSYSISFQR 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Glsi07g1761 280 MobiDBLite consensus disorder prediction 1 100 - -
Glsi07g1761 280 ProSiteProfiles TPR repeat profile. 108 141 IPR019734 GO:0005515
Glsi07g1761 280 MobiDBLite consensus disorder prediction 56 99 - -
Glsi07g1761 280 SUPERFAMILY TPR-like 108 226 IPR011990 GO:0005515
Glsi07g1761 280 PANTHER TETRATRICOPEPTIDE REPEAT PROTEIN 1 38 280 - -
Glsi07g1761 280 Pfam Tetratricopeptide repeat 156 180 IPR019734 GO:0005515
Glsi07g1761 280 Gene3D Tetratricopeptide repeat domain 68 244 IPR011990 GO:0005515
Glsi07g1761 280 ProSiteProfiles TPR repeat profile. 183 216 IPR019734 GO:0005515
Glsi07g1761 280 SMART tpr_5 108 141 IPR019734 GO:0005515
Glsi07g1761 280 SMART tpr_5 183 216 IPR019734 GO:0005515
Glsi07g1761 280 SMART tpr_5 149 182 IPR019734 GO:0005515
Glsi07g1761 280 MobiDBLite consensus disorder prediction 15 33 - -
Glsi07g1761 280 Pfam Tetratricopeptide repeat 184 216 IPR013105 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Glsi07g1761 Glsi-ChrGlsi07 58879411 58883166 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Glsi07g1761 91 239 Calmodulin-binding Proteins AT3G25230 36.943 3.21e-16 76.6